RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 GINS3Q9BRX5 216 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 RTL8AQ9BWD3 113 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 SAV1Q9H4B6 383 aaPredicted RBP16.05■□□□□ 0.16
RFTN1-201ENST00000334133 SPACA1Q9HBV2 294 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 C19orf12Q9NSK7 152 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 NUDT19A8MXV4 375 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 TSPAN9O75954 239 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 FOXF2Q12947 444 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 NMSQ5H8A3 153 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 FAM122CQ6P4D5 195 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 GMPPAQ96IJ6 420 aaPredicted RBP16.04■□□□□ 0.16
RFTN1-201ENST00000334133 ARV1Q9H2C2 271 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 PLK3Q9H4B4 646 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 OBP2BQ9NPH6 170 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 UFSP2Q9NUQ7 469 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 WRBO00258 174 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 WDR1O75083 606 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 FTH1P19P0C7X4 201 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 F2RP25116 425 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 UCP1P25874 307 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 DYNLT3P51808 116 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 SRPXP78539 464 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 ODF3L1Q8IXM7 274 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 OPA3Q9H6K4 179 aa16.04■□□□□ 0.16
RFTN1-201ENST00000334133 USF3Q68DE3 2245 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 SERPINE2P07093 398 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 SEC11BP0C7V7 166 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 ATP6V0CP27449 155 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 DVL1P1P54792 670 aaPredicted RBP16.03■□□□□ 0.16
RFTN1-201ENST00000334133 Q6ZRM9 215 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 LUZP4Q9P127 313 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 TAAR3PQ9P1P4 343 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 RNF150Q9ULK6 438 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 ATMQ13315 3056 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 DAOP14920 347 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 VDAC1P21796 283 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 UCP2P55851 309 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 GUK1Q16774 197 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 ZFP82Q8N141 532 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 OR2G3Q8NGZ4 309 aa16.03■□□□□ 0.16
RFTN1-201ENST00000334133 FAM157AC9JC47 383 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 CTRB1P17538 263 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 SNCAP37840 140 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 FABP6P51161 128 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 CTRB2Q6GPI1 263 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 H1FOOQ8IZA3 346 aaPredicted RBP16.02■□□□□ 0.16
RFTN1-201ENST00000334133 C9orf106Q8NAJ2 232 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 C11orf1Q9H5F2 150 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 ZFP57Q9NU63 452 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 H7C2Y5 167 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 CTXN2P0C2S0 81 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 RND3P61587 244 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 CCL20P78556 96 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 TGFBR3Q03167 851 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 TMEM267Q0VDI3 215 aaPredicted RBP16.02■□□□□ 0.16
RFTN1-201ENST00000334133 OR2B11Q5JQS5 317 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 FAM214BQ7L5A3 538 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 GPR146Q96CH1 333 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 SPIN2AQ99865 258 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 SPIN2BQ9BPZ2 258 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 PKIBQ9C010 78 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 MSL2Q9HCI7 577 aa16.02■□□□□ 0.16
RFTN1-201ENST00000334133 OR8G1Q15617 311 aa16.02■□□□□ 0.15
RFTN1-201ENST00000334133 GABRA6Q16445 453 aa16.02■□□□□ 0.15
RFTN1-201ENST00000334133 HFEQ30201 348 aa16.02■□□□□ 0.15
RFTN1-201ENST00000334133 TPRX1Q8N7U7 411 aa16.02■□□□□ 0.15
RFTN1-201ENST00000334133 OR10V1Q8NGI7 309 aa16.02■□□□□ 0.15
RFTN1-201ENST00000334133 KLF14Q8TD94 323 aaPredicted RBP16.02■□□□□ 0.15
RFTN1-201ENST00000334133 RARRES2Q99969 163 aa16.02■□□□□ 0.15
RFTN1-201ENST00000334133 MLXQ9UH92 298 aa16.02■□□□□ 0.15
RFTN1-201ENST00000334133 A6NLC8 198 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 PSPNO60542 156 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 MRPL49Q13405 166 aaKnown RBP16.01■□□□□ 0.15
RFTN1-201ENST00000334133 TESK1Q15569 626 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 PRAMEF6Q5VXH4 476 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 OR10Z1Q8NGY1 313 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 C2CD4CQ8TF44 421 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 PLEKHF2Q9H8W4 249 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 DOCK11Q5JSL3 2073 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 IGLV2-14P01704 120 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 OR13C7P0DN81 318 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 IAPPP10997 89 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 CEACAM6P40199 344 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 CEBPGP53567 150 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 HNF4GQ14541 408 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 DEFB109BQ30KR1 87 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 RIMS4Q9H426 269 aaPredicted RBP16.01■□□□□ 0.15
RFTN1-201ENST00000334133 LYRM2Q9NU23 88 aaPredicted RBP16.01■□□□□ 0.15
RFTN1-201ENST00000334133 CLCF1Q9UBD9 225 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 ZNF292O60281 2723 aa16.01■□□□□ 0.15
RFTN1-201ENST00000334133 LRP5LA4QPB2 252 aa16■□□□□ 0.15
RFTN1-201ENST00000334133 H0Y980 276 aa16■□□□□ 0.15
RFTN1-201ENST00000334133 DHRS7BQ6IAN0 325 aaPredicted RBP16■□□□□ 0.15
RFTN1-201ENST00000334133 POM121Q96HA1 1249 aa16■□□□□ 0.15
RFTN1-201ENST00000334133 IGKV1-39P01597 117 aa16■□□□□ 0.15
RFTN1-201ENST00000334133 IGKV1D-39P04432 117 aa16■□□□□ 0.15
RFTN1-201ENST00000334133 SNRNP70P08621 437 aaKnown RBP16■□□□□ 0.15
RFTN1-201ENST00000334133 ID3Q02535 119 aa16■□□□□ 0.15
RFTN1-201ENST00000334133 SRSF7Q16629 238 aaKnown RBP eCLIP16■□□□□ 0.15
RFTN1-201ENST00000334133 PRSS44E7EML9 344 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms