RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 CACNG5Q9UF02 275 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 IGKV1D-13A0A0B4J2D9 117 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 TSPAN2O60636 221 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 IGKV1-13P0DP09 117 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 THBS3P49746 956 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 NOGQ13253 232 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 CYP2G1PQ6ZSU1 146 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 ZDHHC23Q8IYP9 409 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 KBTBD11O94819 623 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 IGHMP01871 453 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 EFNA3P52797 238 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 ARL16Q0P5N6 197 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 ABLIM2Q6H8Q1 611 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 ANGPTL4Q9BY76 406 aa17.72■□□□□ 0.43
CMTM4-201ENST00000330687 LIPT2A6NK58 231 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 VDAC1P21796 283 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 CBLN1P23435 193 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 PPP1CBP62140 327 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 FAM69BQ5VUD6 431 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 Q6ZN92 141 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 OSR2Q8N2R0 312 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 ST6GALNAC3Q8NDV1 305 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 SGMS2Q8NHU3 365 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 ZNF385AQ96PM9 386 aaKnown RBP17.71■□□□□ 0.43
CMTM4-201ENST00000330687 B3GAT1Q9P2W7 334 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 RNF150Q9ULK6 438 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 TRAV39A0A0B4J263 110 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 KIR2DL5BA0A0G2JN68 375 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 KIR2DL5BA0A0G2JPC4 375 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 RBMXL2O75526 392 aaKnown RBP17.71■□□□□ 0.43
CMTM4-201ENST00000330687 SERPINA7P05543 415 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 HLA-BQ31612 363 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 KIR2DL5AQ8N109 375 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 LRTM2Q8N967 370 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 TM2D1Q9BX74 207 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 OR51B6Q9H340 312 aa17.71■□□□□ 0.43
CMTM4-201ENST00000330687 CD300LBA8K4G0 201 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 FOXI3A8MTJ6 420 aaPredicted RBP17.7■□□□□ 0.42
CMTM4-201ENST00000330687 OR5G3P0C626 314 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 CCNOP22674 350 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 ACTL10Q5JWF8 245 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 MSX1P28360 303 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 NTSR1P30989 418 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 GRB2P62993 217 aaKnown RBP17.7■□□□□ 0.42
CMTM4-201ENST00000330687 SRPXP78539 464 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 ARF1P84077 181 aaKnown RBP17.7■□□□□ 0.42
CMTM4-201ENST00000330687 BAXQ07812 192 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 ZNF468Q5VIY5 522 aaPredicted RBP17.7■□□□□ 0.42
CMTM4-201ENST00000330687 CRIP3Q6Q6R5 217 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.7■□□□□ 0.42
CMTM4-201ENST00000330687 SPPL3Q8TCT6 385 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 OR4C12Q96R67 309 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 TMEM106BQ9NUM4 274 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 CLDN1O95832 211 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 DTYMKP23919 212 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 EIF3IQ13347 325 aaKnown RBP17.7■□□□□ 0.42
CMTM4-201ENST00000330687 Q6ZWC4 215 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 PP6455Q8WZ26 134 aa17.7■□□□□ 0.42
CMTM4-201ENST00000330687 VPS13AQ96RL7 3174 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 IGKV1-27A0A075B6S5 117 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 PMCHP20382 165 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 PLCXD3Q63HM9 321 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 NUFIP2Q7Z417 695 aaKnown RBP17.69■□□□□ 0.42
CMTM4-201ENST00000330687 WDR5BQ86VZ2 330 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 CADM4Q8NFZ8 388 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 METTL7AQ9H8H3 244 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 THSD7BQ9C0I4 1608 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 HNRNPA1P09651 372 aaKnown RBP eCLIP17.69■□□□□ 0.42
CMTM4-201ENST00000330687 C1QTNF9P0C862 333 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 MPLP40238 635 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 PRAMEF20Q5VT98 475 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 WNT5BQ9H1J7 359 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 KCNS2Q9ULS6 477 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 CELSR3Q9NYQ7 3312 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 TCRBV21S2A2A0A5A6 115 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 ADMP35318 185 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 PAX9P55771 341 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 ZXDAP98168 799 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 LEMD1Q68G75 181 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 VHLLQ6RSH7 139 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 UNQ5815/PRO19632Q6UWF5 114 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 SIGLEC12Q96PQ1 595 aa17.69■□□□□ 0.42
CMTM4-201ENST00000330687 SERF1AO75920 110 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 IGKV3-11P04433 115 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 PSG2P11465 335 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 TCN2P20062 427 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 NPBWR2P48146 333 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 TPPP2P59282 170 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 STPG4Q8N801 248 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 SLC35E1Q96K37 410 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 ALKBH4Q9NXW9 302 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 PPP1R3CQ9UQK1 317 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 TLX3O43711 291 aaPredicted RBP17.68■□□□□ 0.42
CMTM4-201ENST00000330687 EFNA2O43921 213 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 UMODP07911 640 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 GAGE1Q13065 139 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 RPP25LQ8N5L8 163 aaKnown RBP17.68■□□□□ 0.42
CMTM4-201ENST00000330687 FGF14Q92915 247 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 GPR146Q96CH1 333 aa17.68■□□□□ 0.42
CMTM4-201ENST00000330687 DERL1Q9BUN8 251 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms