RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 VDAC1P21796 283 aa12.37□□□□□ -0.43
FNDC1-202ENST00000329629 HSPB9Q9BQS6 159 aa12.37□□□□□ -0.43
FNDC1-202ENST00000329629 LHX9Q9NQ69 397 aa12.37□□□□□ -0.43
FNDC1-202ENST00000329629 PIPOXQ9P0Z9 390 aa12.37□□□□□ -0.43
FNDC1-202ENST00000329629 IGHV3OR15-7A0A075B7D8 119 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 LOC107984156A0A0G2JMH3 177 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 SPAARA0A1B0GVQ0 90 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 CDIPTO14735 213 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 ATP6V0CP27449 155 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 SKP2Q13309 424 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 MOGAT3Q86VF5 341 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 ARL17AQ8IVW1 177 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 HMGCLL1Q8TB92 370 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
FNDC1-202ENST00000329629 SRP14P37108 136 aaKnown RBP12.36□□□□□ -0.43
FNDC1-202ENST00000329629 PLP1P60201 277 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 C1QL3Q5VWW1 255 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 SPINK14Q6IE38 97 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 OR6X1Q8NH79 312 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 IGLV3-16A0A075B6K0 115 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 FFAR1O14842 300 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 ZNF324O75467 553 aaPredicted RBP12.36□□□□□ -0.43
FNDC1-202ENST00000329629 CD82P27701 267 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 COL19A1Q14993 1142 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 BHLHA15Q7RTS1 189 aaPredicted RBP12.36□□□□□ -0.43
FNDC1-202ENST00000329629 Q8WTZ3 238 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 SLC25A33Q9BSK2 321 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 EFNB2P52799 333 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 SPANXN1Q5VSR9 72 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
FNDC1-202ENST00000329629 MGAT2Q10469 447 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 OR8I2Q8N0Y5 310 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 ZNF738Q8NE65 137 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
FNDC1-202ENST00000329629 PITX3O75364 302 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
FNDC1-202ENST00000329629 HOXA6P31267 233 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 GUCA2BQ16661 112 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 LHFPL5Q8TAF8 219 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 PTX4Q96A99 478 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 ZFP64Q9NPA5 681 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 KLK13Q9UKR3 277 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 TRAV8-7A0A075B6U6 113 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 CTXND1A0A1B0GTU2 59 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 TEPPQ6URK8 271 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 NRTNQ99748 197 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 TMEM38BQ9NVV0 291 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 TRAV38-1A0A0B4J264 116 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 F2RL2O00254 374 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 MUC1P15941 1255 aaPredicted RBP12.35□□□□□ -0.43
FNDC1-202ENST00000329629 RTP5Q14D33 572 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 PATE3B3GLJ2 98 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 BRS3P32247 399 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 CD81P60033 236 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 COX14Q96I36 57 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 ZNF79Q15937 498 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 RABAC1Q9UI14 185 aa12.35□□□□□ -0.43
FNDC1-202ENST00000329629 COL11A2P13942 1736 aaPredicted RBP12.34□□□□□ -0.43
FNDC1-202ENST00000329629 RELBQ01201 579 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 RNFT1Q5M7Z0 435 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 OR8B3Q8NGG8 313 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 APOBEC4Q8WW27 367 aaKnown RBP12.34□□□□□ -0.43
FNDC1-202ENST00000329629 OR8B2Q96RD0 313 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 TNFSF18Q9UNG2 199 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 TRGC2P03986 189 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 HARBI1Q96MB7 349 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 CXCL2P19875 107 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 FAM3BP58499 235 aaPredicted RBP12.34□□□□□ -0.43
FNDC1-202ENST00000329629 AESQ08117 197 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 SGMS2Q8NHU3 365 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
FNDC1-202ENST00000329629 TINAGQ9UJW2 476 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 OR2W1Q9Y3N9 320 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 OR51B2Q9Y5P1 312 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 A0A1B0GU03 582 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 SRD5A2P31213 254 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
FNDC1-202ENST00000329629 PRNDQ9UKY0 176 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 FABP2P12104 132 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 KIR2DL1P43626 348 aaPredicted RBP12.34□□□□□ -0.43
FNDC1-202ENST00000329629 PAFAH1B2P68402 229 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 RUNX1Q01196 453 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 SPRED2Q7Z698 418 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
FNDC1-202ENST00000329629 KIR2DL2P43627 348 aaPredicted RBP12.33□□□□□ -0.44
FNDC1-202ENST00000329629 FAM216AQ8WUB2 273 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 ASB5Q8WWX0 329 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 PAXXQ9BUH6 204 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 MRPL13Q9BYD1 178 aaKnown RBP12.33□□□□□ -0.44
FNDC1-202ENST00000329629 HOXA4Q00056 320 aaPredicted RBP12.33□□□□□ -0.44
FNDC1-202ENST00000329629 SEC11BP0C7V7 166 aa12.33□□□□□ -0.44
FNDC1-202ENST00000329629 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
FNDC1-202ENST00000329629 ZNF519Q8TB69 540 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms