RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 DHODHQ02127 395 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 PDCD1Q15116 288 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 KCNJ8Q15842 424 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 AADACL3Q5VUY0 350 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF660Q6AZW8 331 aaPredicted RBP13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 C1orf87Q8N0U7 546 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 CLDND2Q8NHS1 167 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 MRPL30Q8TCC3 161 aaKnown RBP13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 UFSP2Q9NUQ7 469 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF581Q9P0T4 197 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 IL36RNQ9UBH0 155 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF69Q9UC07 566 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 OPN4Q9UHM6 478 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 VSIG4Q9Y279 399 aa13.68□□□□□ -0.22
PDLIM1-201ENST00000329399 MEIKINA0A087WXM9 373 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 A0A0B4J2A0 478 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 TMEM30CPA0ZSE6 113 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 NPIPB11E5RHQ5 1161 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 FABP7O15540 132 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 CTSDP07339 412 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 GSTT2P0CG29 244 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 VSIG10L2P0DP72 767 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 MUC1P15941 1255 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF16P17020 682 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 EIF2B2P49770 351 aaKnown RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 LMO4P61968 165 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 FCN2Q15485 313 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 ZFP69Q49AA0 526 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF826PQ6ZT77 177 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 TMED4Q7Z7H5 227 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 LYG2Q86SG7 212 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 MARCH1Q8TCQ1 289 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF2Q9BSG1 426 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 GCM1Q9NP62 436 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 MBNL3Q9NUK0 354 aaKnown RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 DNAJB11Q9UBS4 358 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 SHPKQ9UHJ6 478 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 FBN1P35555 2871 aaKnown RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 WNK2Q9Y3S1 2297 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 IGKV1D-8A0A087WSZ0 117 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 PIGBOS1A0A0B4J2F0 54 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 FAM157AC9JC47 383 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 C1QBP02746 253 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 CYB5R2Q6BCY4 276 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 MOGAT3Q86VF5 341 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 SLC38A6Q8IZM9 456 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 FAM185AQ8N0U4 392 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 BATF2Q8N1L9 274 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 C12orf45Q8N5I9 185 aaPredicted RBP13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 OR5D13Q8NGL4 314 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 MAFIPQ8WZ33 124 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 MRGPRFQ96AM1 343 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 SNX22Q96L94 193 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 PHB2Q99623 299 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 SEC22CQ9BRL7 303 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 RAB9BQ9NP90 201 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 KCNIP1Q9NZI2 227 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 PPP1R3CQ9UQK1 317 aa13.67□□□□□ -0.22
PDLIM1-201ENST00000329399 BOLA2-SMG1P6H3BVE0 249 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 SIRPB1O00241 398 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 SDCBPO00560 298 aaPredicted RBP13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 DUS4LO95620 317 aaKnown RBP13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 HLA-GP17693 338 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 ZBTB25P24278 435 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 ERP29P30040 261 aaKnown RBP13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 PRDX2P32119 198 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 RAP2BP61225 183 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 HERV-K104P61576 105 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 IL13RA1P78552 427 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 HLA-DRB3P79483 266 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 CD83Q01151 205 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 GCSAMQ8N6F7 178 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 FAM216AQ8WUB2 273 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 MITD1Q8WV92 249 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 MOB3AQ96BX8 217 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 CABLES2Q9BTV7 478 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 BEX2Q9BXY8 128 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF436Q9C0F3 470 aaPredicted RBP13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 DNTTIP1Q9H147 329 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 BEX1Q9HBH7 125 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 RANGRFQ9HD47 186 aaPredicted RBP13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 OR14J1Q9UGF5 321 aa13.66□□□□□ -0.22
PDLIM1-201ENST00000329399 C9orf170A2RU37 121 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 RFPL4AA6NLU0 287 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 RFPL4AL1F8VTS6 287 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 RGS11O94810 467 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF205O95201 554 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 HLA-AP01891 365 aaKnown RBP13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 GIPP09681 153 aaPredicted RBP13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 PGAM2P15259 253 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 NPY4RP50391 375 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 RIPPLY3P57055 190 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 DHRS2Q13268 280 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 HFEQ30201 348 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 C6orf183Q5T699 404 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 LIN54Q6MZP7 749 aa13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 MUC20Q8N307 709 aaPredicted RBP13.65□□□□□ -0.22
PDLIM1-201ENST00000329399 ZNF561Q8N587 486 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms