RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 OPN1MW2P0DN77 364 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 OPN1MW3P0DN78 364 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 PTAFRP25105 342 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 VKORC1L1Q8N0U8 176 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 ZNRF1Q8ND25 227 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 OR4A4PQ8NGN8 299 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 SHARPINQ9H0F6 387 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 EDARQ9UNE0 448 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 PUS1Q9Y606 427 aaKnown RBP eCLIP9.04□□□□□ -0.96
CUL4A-201ENST00000326335 ARHGAP32A7KAX9 2087 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 ST8SIA5O15466 376 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 DEDDO75618 318 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 PMELP40967 661 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 FGF8P55075 233 aaPredicted RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 TGIF2LYQ8IUE0 185 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 OR5A2Q8NGI9 324 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 MOB3AQ96BX8 217 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 OR2D2Q9H210 308 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 RNF122Q9H9V4 155 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 MALRD1Q5VYJ5 2156 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 TRAV17A0A0B4J275 112 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 ADCYAP1P18509 176 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 ALDH3B1P43353 468 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 TMEM45BQ96B21 275 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 MSI2Q96DH6 328 aaKnown RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 USB1Q9BQ65 265 aaKnown RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 ASCL3Q9NQ33 180 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 TMEM100Q9NV29 134 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 TRDCB7Z8K6 153 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 KRBOX1C9JBD0 128 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 RPL35P42766 123 aaKnown RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 ZNF528Q3MIS6 628 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 KRBOX4Q5JUW0 171 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 ZADH2Q8N4Q0 377 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 OR5T1Q8NG75 326 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 OR2G3Q8NGZ4 309 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 SNIP1Q8TAD8 396 aaKnown RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 MRPL30Q8TCC3 161 aaKnown RBP9.03□□□□□ -0.96
CUL4A-201ENST00000326335 RPS10P5Q9NQ39 176 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 ZNF391Q9UJN7 358 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 AUP1Q9Y679 476 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 URGCP-MRPS24S4R325 110 aa9.03□□□□□ -0.96
CUL4A-201ENST00000326335 SHOXO15266 292 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 GALR2O43603 387 aaPredicted RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 ATG12O94817 140 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 DTYMKP23919 212 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 G6PCP35575 357 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 DYNLT3P51808 116 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 WFDC8Q8IUA0 241 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 FGFRL1Q8N441 504 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 C10orf35Q96D05 121 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 RARRES2Q99969 163 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 FAM117AQ9C073 453 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 DCAF16Q9NXF7 216 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 RCC2Q9P258 522 aaKnown RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 ZDHHC8Q9ULC8 765 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 HSF4Q9ULV5 492 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 PSG11Q9UQ72 335 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 POLQO75417 2590 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 IGSF23A1L1A6 192 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 A8MXK9 166 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 MLNRO43193 412 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 PTBP3O95758 552 aaKnown RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 SFTA3P0C7M3 94 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 ZNF345Q14585 488 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 LCN15Q6UWW0 184 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 THNSL2Q86YJ6 484 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 SFT2D1Q8WV19 159 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 LRRC29Q8WV35 223 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 NINJ1Q92982 152 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 GMPPAQ96IJ6 420 aaPredicted RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 RSG1Q9BU20 258 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 MYOZ1Q9NP98 299 aaPredicted RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 GNG12Q9UBI6 72 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 LPAR3Q9UBY5 353 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 PROCRQ9UNN8 238 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 ZNF724A8MTY0 619 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 RAMP3O60896 148 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 PGLYRP1O75594 196 aaPredicted RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 TMEM50AO95807 157 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 PRR30Q53SZ7 412 aaPredicted RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 DUX4L9Q6RFH8 374 aaPredicted RBP9.02□□□□□ -0.97
CUL4A-201ENST00000326335 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 CCDC36Q8IYA8 594 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 LOXL4Q96JB6 756 aa9.02□□□□□ -0.97
CUL4A-201ENST00000326335 TMEM218A2RU14 115 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 LINC01387J3KSC0 135 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 CLDN1O95832 211 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 HAND1O96004 215 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 COL8A2P25067 703 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 CCL8P80075 99 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 EWSR1Q01844 656 aaKnown RBP eCLIP9.01□□□□□ -0.97
CUL4A-201ENST00000326335 GABRA6Q16445 453 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 CLEC12BQ2HXU8 276 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 TMEM211Q6ICI0 200 aa9.01□□□□□ -0.97
CUL4A-201ENST00000326335 DHRS11Q6UWP2 260 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms