RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GTF3C1Q12789 2109 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 HBE1P02100 147 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 SMIM6P0DI80 62 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 CEBPDP49716 269 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF816Q0VGE8 651 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 RIPPLY2Q5TAB7 128 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 C20orf204Q6ZNR8 217 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 TVP23CQ96ET8 276 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 PRSS50Q9UI38 385 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 KLF2Q9Y5W3 355 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 PTPRZ1P23471 2315 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 EXPH5Q8NEV8 1989 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 FAM157AC9JC47 383 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 CYTIPO60759 359 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 DFFBO76075 338 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 SCAF4O95104 1147 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 CEACAM21Q3KPI0 293 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 LRTM2Q8N967 370 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 OR2M7Q8NG81 312 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 ATP5SQ99766 215 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 TOLLIPQ9H0E2 274 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 FAM234AQ9H0X4 552 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 DECR2Q9NUI1 292 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 ATP23Q9Y6H3 246 aa11.02□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF503-AS2A6NEH8 195 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 CDIPTO14735 213 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 MMP7P09237 267 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 CTXN2P0C2S0 81 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 MMP9P14780 707 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 B2MP61769 119 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 GNG3P63215 75 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 PMP22Q01453 160 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF573Q86YE8 665 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 LILRB1Q8NHL6 650 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 OBP2BQ9NPH6 170 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 GSN-AS1Q9NRJ2 163 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 RIF1Q5UIP0 2472 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 CD200P41217 278 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 ABLIM2Q6H8Q1 611 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 NUFIP2Q7Z417 695 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 OR10V1Q8NGI7 309 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 TECTBQ96PL2 329 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 C1QTNF5Q9BXJ0 243 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 TMPRSS5Q9H3S3 457 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 CDH20Q9HBT6 801 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 OR2W1Q9Y3N9 320 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 IGKV1-6A0A0C4DH72 117 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 IGHEP01854 428 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 TRGC2P03986 189 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 OR8U8P0C7N1 319 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 IL2RGP31785 369 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 ARG2P78540 354 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 COL19A1Q14993 1142 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 FAM209BQ5JX69 171 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF880Q6PDB4 577 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 FAM173AQ9BQD7 235 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 REPIN1Q9BWE0 567 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 RPRMQ9NS64 109 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 SLC39A9Q9NUM3 307 aa11.01□□□□□ -0.65
HMGCS1-201ENST00000325110 SMCO3A2RU48 225 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 CEACAM6P40199 344 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 UBE2NP61088 152 aaKnown RBP11□□□□□ -0.65
HMGCS1-201ENST00000325110 HOXA4Q00056 320 aaPredicted RBP11□□□□□ -0.65
HMGCS1-201ENST00000325110 TRA2AQ13595 282 aaKnown RBP eCLIP11□□□□□ -0.65
HMGCS1-201ENST00000325110 RNF212Q495C1 297 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 CNEP1R1Q8N9A8 125 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF610Q8N9Z0 462 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 RFESDQ8TAC1 157 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 LHX4Q969G2 390 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 PRDM14Q9GZV8 571 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 VSIRQ9H7M9 311 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 FZR1Q9UM11 496 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 GAB2Q9UQC2 676 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 PPP1R2P9O14990 202 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 SYNGR2O43760 224 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 IGHV3-13P01766 116 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 IGHV3-7P01780 117 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
HMGCS1-201ENST00000325110 TPRX1Q8N7U7 411 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 NINJ1Q92982 152 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 ADGRG7Q96K78 797 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 SLC25A22Q9H936 323 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 DOK5Q9P104 306 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 AGAP20933 346 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 UCP1P25874 307 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 SSPNQ14714 243 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 TMPRSS7Q7RTY8 843 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 Q8WTZ3 238 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 SDSLQ96GA7 329 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 FGF23Q9GZV9 251 aaPredicted RBP11□□□□□ -0.65
HMGCS1-201ENST00000325110 DLL3Q9NYJ7 618 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 IL36GQ9NZH8 169 aa11□□□□□ -0.65
HMGCS1-201ENST00000325110 CLEC18AA5D8T8 446 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 LY86O95711 162 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 TFF1P04155 84 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 GABRA2P47869 451 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 TAS2R30P59541 319 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms