RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SLC25A38Q96DW6 304 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 LPAR5Q9H1C0 372 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 COA4Q9NYJ1 87 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 CLN8Q9UBY8 286 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 SF3B6Q9Y3B4 125 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 B4E171 279 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 OR5AL1P0C617 328 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 MMP9P14780 707 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 TSPAN7P41732 249 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 GSX1Q9H4S2 264 aaPredicted RBP9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 NPTNQ9Y639 398 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 ZNFX1Q9P2E3 1918 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 TCAPO15273 167 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 SYNGR1O43759 233 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 PTBP3O95758 552 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 SIGLEC14Q08ET2 396 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 Q1RN00 199 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 TMEM255AQ5JRV8 349 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 TEX30Q5JUR7 227 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 RAB1CQ92928 201 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 SAP30LQ9HAJ7 183 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 FAM206AQ9NX38 181 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 CRISP2P16562 243 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 CEBPEQ15744 281 aa9.49□□□□□ -0.89
SNRNP200-201ENST00000323853 H0Y980 276 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 J3QR89 54 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 CAMPP49913 170 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 FGF12P61328 243 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 PERPQ96FX8 193 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 ZNF71Q9NQZ8 489 aaPredicted RBP9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 MFSD2BA6NFX1 497 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 PMS2CLQ68D20 193 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 LAIR2Q6ISS4 152 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 C16orf82Q7Z2V1 217 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 FLYWCH2Q96CP2 140 aaKnown RBP9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 WIPI2Q9Y4P8 454 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 CRYBA1P05813 215 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 OR4A8P0C604 315 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 ZNF788Q6ZQV5 615 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 RALGAPA2Q2PPJ7 1873 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 SMIM6P0DI80 62 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 HKR1P10072 659 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 SULT1A2P50226 295 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 IGSF11Q5DX21 431 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 ZNF645Q8N7E2 425 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 FAM181AQ8N9Y4 354 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 OR52L2PQ8NGH6 319 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 OR2J1Q9GZK6 312 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 IGSF23A1L1A6 192 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 TCL1AP56279 114 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 COX19Q49B96 90 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 TEPPQ6URK8 271 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 UNQ9370/PRO34162Q6UXP9 181 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 OR1L1Q8NH94 360 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 MSL2Q9HCI7 577 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 CLEC5AQ9NY25 188 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 FUT9Q9Y231 359 aa9.48□□□□□ -0.89
SNRNP200-201ENST00000323853 P01737 135 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 PPP1CCP36873 323 aaKnown RBP9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 LRP11Q86VZ4 500 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 PSME4Q14997 1843 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 C1orf100Q5SVJ3 147 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 RND1Q92730 232 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 ANKRD55Q3KP44 614 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 C1orf185Q5T7R7 199 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 OR4X1Q8NH49 305 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 SNX22Q96L94 193 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 G6PC2Q9NQR9 355 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 GPR132Q9UNW8 380 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 IGKV1D-42A0A075B6H8 117 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 ZNF383Q8NA42 475 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 SCARF2Q96GP6 870 aaPredicted RBP9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 HPRT1P00492 218 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 MUC1P15941 1255 aaPredicted RBP9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 LGALS7P47929 136 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 APOBEC4Q8WW27 367 aaKnown RBP9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 HELTA6NFD8 242 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 B2MP61769 119 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 H1FOOQ8IZA3 346 aaPredicted RBP9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 RASL11BQ9BPW5 248 aa9.47□□□□□ -0.89
SNRNP200-201ENST00000323853 FAM157CP0CG43 387 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 PRDX2P32119 198 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 OR10C1Q96KK4 312 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 HARBI1Q96MB7 349 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 APCSP02743 223 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 C1orf174Q8IYL3 243 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 GOLGA4Q13439 2230 aaKnown RBP9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 A0A1W2PRD5 423 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 A0A1W2PRF3 423 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 A0A1W2PRM7 423 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 PGA5P0DJD9 388 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 DOLPP1Q86YN1 238 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 TGIF2LYQ8IUE0 185 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 MRPL30Q8TCC3 161 aaKnown RBP9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 TMEM222Q9H0R3 208 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 LHFPL6Q9Y693 200 aa9.46□□□□□ -0.89
SNRNP200-201ENST00000323853 ZXDCQ2QGD7 858 aaPredicted RBP9.46□□□□□ -0.9
SNRNP200-201ENST00000323853 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms