RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 TBX15Q96SF7 602 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 SRXN1Q9BYN0 137 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 CCL28Q9NRJ3 127 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 TMED3Q9Y3Q3 217 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 PLCE1Q9P212 2302 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 CELA3AP09093 270 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 NPBWR2P48146 333 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 SIGLECL1Q8N7X8 197 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 DTD1Q8TEA8 209 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 Q8WTZ3 238 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 FREM1Q5H8C1 2179 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 CLEC18AA5D8T8 446 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 SLC22A20A6NK97 555 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 PDCD6O75340 191 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 BCL3P20749 454 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 FAM3BP58499 235 aaPredicted RBP13.23□□□□□ -0.29
VARS2-201ENST00000321897 FHL1Q13642 323 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 IL13RA2Q14627 380 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 CLEC18CQ8NCF0 446 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 BORCS7Q96B45 105 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 SPSB1Q96BD6 273 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 RNF24Q9Y225 148 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 CDIPTO14735 213 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 OPN1MWP04001 364 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 OPN1MW2P0DN77 364 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 OPN1MW3P0DN78 364 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 VN1R17PQ8TDU5 208 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 PCGF1Q9BSM1 259 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 PRSS50Q9UI38 385 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 KIR2DS1A0A191URI9 304 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 FGF16O43320 207 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 HOXA5P20719 270 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 KIR2DS4P43632 304 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 KIR2DS1Q14954 304 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 TBC1D28Q2M2D7 210 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 SAP25Q8TEE9 199 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 HEYLQ9NQ87 328 aaPredicted RBP13.22□□□□□ -0.29
VARS2-201ENST00000321897 CACNG5Q9UF02 275 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 PLXNA4Q9HCM2 1894 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 AGFG2O95081 481 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 NGFP01138 241 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 CRYAAP02489 173 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 SRD5A2P31213 254 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 POC1AQ8NBT0 407 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 OR2T10Q8NGZ9 312 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 POC1BQ8TC44 478 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 ADGRG7Q96K78 797 aa13.22□□□□□ -0.29
VARS2-201ENST00000321897 ZNF735P0CB33 412 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 FKBP2P26885 142 aaKnown RBP13.21□□□□□ -0.29
VARS2-201ENST00000321897 MEOX1P50221 254 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 PPP1CBP62140 327 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 CTAG1AP78358 180 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 PHYHD1Q5SRE7 291 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 GAPTQ8N292 157 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 CYYR1Q96J86 154 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 KIAA1324LA8MWY0 1029 aaPredicted RBP13.21□□□□□ -0.29
VARS2-201ENST00000321897 RAB4AP20338 218 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 SMIM8Q96KF7 97 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 TMEM204Q9BSN7 226 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 STARD10Q9Y365 291 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
VARS2-201ENST00000321897 CACNA1AO00555 2505 aa13.21□□□□□ -0.3
VARS2-201ENST00000321897 GAPDHP04406 335 aaKnown RBP13.21□□□□□ -0.3
VARS2-201ENST00000321897 TMEM50BP56557 158 aa13.21□□□□□ -0.3
VARS2-201ENST00000321897 SUMO1P63165 101 aaKnown RBP13.21□□□□□ -0.3
VARS2-201ENST00000321897 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.3
VARS2-201ENST00000321897 CHST5Q9GZS9 411 aa13.21□□□□□ -0.3
VARS2-201ENST00000321897 ZNF586Q9NXT0 402 aa13.21□□□□□ -0.3
VARS2-201ENST00000321897 PCDH15Q96QU1 1955 aa13.21□□□□□ -0.3
VARS2-201ENST00000321897 IGHEP01854 428 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 HNRNPA3P51991 378 aaKnown RBP13.2□□□□□ -0.3
VARS2-201ENST00000321897 PAX5Q02548 391 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 LURAP1LQ8IV03 231 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 GPR27Q9NS67 375 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 ZNF107Q9UII5 783 aaPredicted RBP13.2□□□□□ -0.3
VARS2-201ENST00000321897 DNAH14Q0VDD8 3507 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 DANCRP0C864 163 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 FNDC7Q5VTL7 733 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 BTNL3Q6UXE8 466 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 TMEM252Q8N6L7 170 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 M1APQ8TC57 530 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 KCNE4Q8WWG9 221 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 MISP3Q96FF7 219 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 KIAA1456Q9P272 454 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 PMS2P1A4D2B8 440 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 APOA2P02652 100 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 TAS2R60P59551 318 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 CCL20P78556 96 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 COTL1Q14019 142 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 BMPERQ8N8U9 685 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 OR2H1Q9GZK4 316 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 PCED1AQ9H1Q7 454 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 TMEM38BQ9NVV0 291 aa13.2□□□□□ -0.3
VARS2-201ENST00000321897 TRGV5A0A0B4J1U4 118 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 SCTP09683 121 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 MSMO1Q15800 293 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms