RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 U3KQ87 197 aa7.96□□□□□ -1.14
TMEM39A-201ENST00000319172 CHD8Q9HCK8 2581 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 A0A0B4J293 547 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 H0YL77 283 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 NBL1P41271 181 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 KLRB1Q12918 225 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 ASPHD2Q6ICH7 369 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 RBMXL1Q96E39 390 aaKnown RBP7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 MS4A5Q9H3V2 200 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 MTCH1Q9NZJ7 389 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 TMED3Q9Y3Q3 217 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 PCNX3Q9H6A9 2034 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 TRAV38-1A0A0B4J264 116 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 IGHV2OR16-5A0A0B4J2B6 119 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 CST4P01036 141 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 MMP7P09237 267 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 POLR2GP62487 172 aaKnown RBP eCLIP7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 LY6DQ14210 128 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 IL13RA2Q14627 380 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 MPPED2Q15777 294 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 SPINK9Q5DT21 86 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 TMEM182Q6ZP80 229 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 SNRNP40Q96DI7 357 aaKnown RBP7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 RAB1BQ9H0U4 201 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 SH2D2AQ9NP31 389 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 OR6C3Q9NZP0 311 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 GPR132Q9UNW8 380 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 OR2W1Q9Y3N9 320 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 A0A1W2PRD5 423 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 A0A1W2PRF3 423 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 A0A1W2PRM7 423 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 CCL1P22362 96 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 KCNJ3P48549 501 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 SIGIRRQ6IA17 410 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 PLEKHA2Q9HB19 425 aa7.95□□□□□ -1.14
TMEM39A-201ENST00000319172 hADV38S2A0JD32 116 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OOEPA6NGQ2 149 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 E9PLN8 166 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 JTBO76095 146 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 GYPAP02724 150 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 COX7A1P24310 79 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 HGFACQ04756 655 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 TBR1Q16650 682 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 LGALSLQ3ZCW2 172 aaPredicted RBP7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 Q5BKY6 102 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 FAM201AQ5SY85 155 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 LIAT1Q6ZQX7 453 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OR5D13Q8NGL4 314 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 ERGIC1Q969X5 290 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 PKIBQ9C010 78 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 ALX4Q9H161 411 aaPredicted RBP7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 PSENENQ9NZ42 101 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 CCDC168Q8NDH2 2452 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 FAM24AA6NFZ4 105 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 ST8SIA5O15466 376 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 BCL2L11O43521 198 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 WNT5AP41221 380 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 RTP5Q14D33 572 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 C9orf62Q8N4C0 152 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OR52L2PQ8NGH6 319 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 RAB1CQ92928 201 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 CISD1Q9NZ45 108 aaKnown RBP7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 HSF4Q9ULV5 492 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 SHANK1Q9Y566 2161 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 CLEC18AA5D8T8 446 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 PRSS44E7EML9 344 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 CYB5R3P00387 301 aaPredicted RBP7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 SEZ6L2Q6UXD5 910 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 CLEC18CQ8NCF0 446 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 PIGMQ9H3S5 423 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 KIAA1456Q9P272 454 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 MLXQ9UH92 298 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 SSUH2Q9Y2M2 353 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 DKK1O94907 266 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OPN1MWP04001 364 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OPN1MW2P0DN77 364 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OPN1MW3P0DN78 364 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 RAB4BP61018 213 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 RTL8BQ17RB0 113 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OVCH2Q7RTZ1 564 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OR4A4PQ8NGN8 299 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 OR1L1Q8NH94 360 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 SFT2D1Q8WV19 159 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 RBPMSQ93062 196 aaKnown RBP7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 C5orf66Q9H5L9 145 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 ONECUT1Q9UBC0 465 aa7.94□□□□□ -1.14
TMEM39A-201ENST00000319172 CDK2AP1O14519 115 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 CA11O75493 328 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 TMEM11P17152 192 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 GZMHP20718 246 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 Q6ZS92 163 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 MRGPRFQ96AM1 343 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 CNTNAP3Q9BZ76 1288 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 TMEM231Q9H6L2 316 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 ZNF665Q9H7R5 613 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 LPAR2Q9HBW0 351 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 MED19A0JLT2 244 aaPredicted RBP7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 NKX2-6A6NCS4 301 aa7.93□□□□□ -1.14
TMEM39A-201ENST00000319172 GPR37O15354 613 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms