RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 LINC00312Q9Y6C7 94 aa12.68□□□□□ -0.38
PDLIM5-202ENST00000318007 A0A1W2PPE3 182 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 ANKRD20A5PA0PJZ0 165 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 CYSRT1A8MQ03 144 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 RAB3DO95716 219 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 CSF1P09603 554 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 TAS2R19P59542 299 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 C6orf183Q5T699 404 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 ZNF880Q6PDB4 577 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 OR2S2Q9NQN1 319 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 ZNRD1Q9P1U0 126 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 CREBBPQ92793 2442 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 AMY2AP04746 511 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 PPP1CCP36873 323 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 GNG10P50151 68 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 TSPAN5P62079 268 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 GALMQ96C23 342 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 COX4I2Q96KJ9 171 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 GINS4Q9BRT9 223 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 CR1P17927 2039 aa12.67□□□□□ -0.38
PDLIM5-202ENST00000318007 KIR2DS1A0A191URI9 304 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 KBTBD11-OT1A0A1B0GTJ5 212 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 PLA2G10O15496 165 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 SPINT2O43291 252 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 TPPPO94811 219 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 ZNF728P0DKX0 622 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 KIR2DS4P43632 304 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 CCR6P51684 374 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 FXYD4P59646 89 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 HMGN3Q15651 99 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 PRSS57Q6UWY2 283 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 MOB1BQ7L9L4 216 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 POC5Q8NA72 575 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 PCGF1Q9BSM1 259 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 C11orf54Q9H0W9 315 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 HRASLSQ9HDD0 168 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 GNG12Q9UBI6 72 aa12.66□□□□□ -0.38
PDLIM5-202ENST00000318007 TRBV23-1A0A0A0MS06 115 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 A0A1W2PRD5 423 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 A0A1W2PRF3 423 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 A0A1W2PRM7 423 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 LIPFP07098 398 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 AKAIN1P0CW23 69 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 OR5H8P0DN80 308 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 PAX5Q02548 391 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 DCTN2Q13561 401 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 TMEM17Q86X19 198 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 OR51S1Q8NGJ8 323 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 SLC6A7Q99884 636 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 GAL3ST2Q9H3Q3 398 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 NECAP2Q9NVZ3 263 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 TRBV6-6A0A0A6YYG2 114 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 FOXH1O75593 365 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 IFNA6P05013 189 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 GZMHP20718 246 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 COX7A1P24310 79 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 CEACAM6P40199 344 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 MEF2CQ06413 473 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 BAMBIQ13145 260 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 CDK10Q15131 360 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 TMEM249Q2WGJ8 235 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 CD276Q5ZPR3 534 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 FAHD2BQ6P2I3 314 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 TMEM229BQ8NBD8 167 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 OR10J5Q8NHC4 309 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 MSI2Q96DH6 328 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 FAHD2AQ96GK7 314 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 TAS2R8Q9NYW2 309 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 ANAPC10Q9UM13 185 aa12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 UBE2J1Q9Y385 318 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-202ENST00000318007 ACANP16112 2415 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 IGHV2-70DA0A0C4DH43 119 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 GPR37O15354 613 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 LYRM1O43325 122 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 ECDO95905 644 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 TGFAP01135 160 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 MSMBP08118 114 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 FCGR2CP31995 323 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 TAS2R46P59540 309 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 AP3S2P59780 193 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 KLRD1Q13241 179 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 OR4A4PQ8NGN8 299 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 TOMM40LQ969M1 308 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 ZNF2Q9BSG1 426 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 SUCNR1Q9BXA5 334 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 HIF1ANQ9NWT6 349 aa12.64□□□□□ -0.39
PDLIM5-202ENST00000318007 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 ENSAO43768 121 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 ZNF16P17020 682 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 NAT1P18440 290 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 OVCH2Q7RTZ1 564 aa12.63□□□□□ -0.39
PDLIM5-202ENST00000318007 TLN2Q9Y4G6 2542 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms