RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 MRGPRDQ8TDS7 321 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 TMUB1Q9BVT8 246 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 ZMAT3Q9HA38 289 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 HSPB11Q9Y547 144 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 M0QYG6 137 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 TSPAN15O95858 294 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 THBDP07204 575 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 OR5G3P0C626 314 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 TMEM11P17152 192 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 NKX2-1P43699 371 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 HTD2P86397 168 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 RBPMS2Q6ZRY4 209 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 LYG2Q86SG7 212 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 TCTE3Q8IZS6 198 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 OR8H3Q8N146 312 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF561Q8N587 486 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 TCTEX1D1Q8N7M0 179 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 DRAXINQ8NBI3 349 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 OR4F17Q8NGA8 305 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 OR4F5Q8NH21 305 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 KLF14Q8TD94 323 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 OR4F4Q96R69 305 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 ICMTO60725 284 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 MBP02144 154 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 C1QBP02746 253 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 HRH1P35367 487 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 UBE2V2Q15819 145 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 C12orf54Q6X4T0 127 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 CADM3Q8N126 398 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF524Q96C55 264 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 FLYWCH2Q96CP2 140 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 STARD4Q96DR4 205 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 DMRTB1Q96MA1 342 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 MSL2Q9HCI7 577 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 SLC2A8Q9NY64 477 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 TREM2Q9NZC2 230 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 RBMX2Q9Y388 322 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 PLA2G10O15496 165 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 KCNAB3O43448 404 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 CTSDP07339 412 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 GLI4P10075 376 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 CCR6P51684 374 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 TIGITQ495A1 244 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 KDF1Q8NAX2 398 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 BSCL2Q96G97 398 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 NPFFR1Q9GZQ6 430 aa7.33□□□□□ -1.24
PDLIM5-201ENST00000317968 A0A1W2PS18 150 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 C7orf66A4D0T2 115 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 TOX4O94842 621 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 OR10J4P0C629 311 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 CECR9P0C854 216 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 ACKR3P25106 362 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 HTR1DP28221 377 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 TMEM33P57088 247 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 UBE2G1P62253 170 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM27E3Q08E93 113 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 OR4A4PQ8NGN8 299 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 C20orf24Q9BUV8 137 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 PPIL3Q9H2H8 161 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 SLA2Q9H6Q3 261 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM89BQ8N5H3 189 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 MPDZO75970 2070 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 K7N7A8 449 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 M0QZK8 103 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 CD74P04233 296 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 MUC1P15941 1255 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 USF1P22415 310 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 NPBWR1P48145 328 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 LINC00303Q3SY05 128 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM209BQ5JX69 171 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 CCDC28AQ8IWP9 274 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 C7orf69Q9H7B7 122 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 TRDCB7Z8K6 153 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM157AC9JC47 383 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 OR4E1P0C645 316 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 OR3A1P47881 315 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 CHAC2Q8WUX2 184 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 MALSU1Q96EH3 234 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 IGHV2OR16-5A0A0B4J2B6 119 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 NDUFS8O00217 210 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 FCGR3BO75015 233 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 KLK2P20151 261 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 EFNA4P52798 201 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 Q6ZSR3 168 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 ARL6Q9H0F7 186 aa7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 TNRC6BQ9UPQ9 1833 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-201ENST00000317968 BAMBIQ13145 260 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 ACOT6Q3I5F7 207 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 OR2B11Q5JQS5 317 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 OR4S1Q8NGB4 309 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 NMES1Q9C002 83 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF436Q9C0F3 470 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 A0A087WV48 116 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 A0A0U1RQK1 487 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 DUXBA0A1W2PPF3 345 aa7.31□□□□□ -1.24
PDLIM5-201ENST00000317968 PQLC2LA1A4F0 135 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms