RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 Q6ZS92 163 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 ZADH2Q8N4Q0 377 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 RBMXL3Q8N7X1 1067 aaKnown RBP11.19□□□□□ -0.62
CPNE1-201ENST00000317677 SEMA6DQ8NFY4 1073 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 PP6455Q8WZ26 134 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 AQP3Q92482 292 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-201ENST00000317677 GMPPAQ96IJ6 420 aaPredicted RBP11.19□□□□□ -0.62
CPNE1-201ENST00000317677 BOD1L1Q8NFC6 3051 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 DHRS7CA6NNS2 312 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 CEACAM18A8MTB9 384 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 CDC14BO60729 498 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 DFFBO76075 338 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 TK1P04183 234 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 GLIPR1P48060 266 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 RPP30P78346 268 aaKnown RBP11.18□□□□□ -0.62
CPNE1-201ENST00000317677 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM42Q69YG0 159 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 RPUSD3Q6P087 351 aaKnown RBP11.18□□□□□ -0.62
CPNE1-201ENST00000317677 ZNF573Q86YE8 665 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 C9orf106Q8NAJ2 232 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 POC1AQ8NBT0 407 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 ADAD2Q8NCV1 583 aaKnown RBP11.18□□□□□ -0.62
CPNE1-201ENST00000317677 SPSB4Q96A44 273 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 C10orf35Q96D05 121 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 BANF2Q9H503 90 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 PLEKHA2Q9HB19 425 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 CRIM1Q9NZV1 1036 aa11.18□□□□□ -0.62
CPNE1-201ENST00000317677 RPLP1P05386 114 aaKnown RBP11.17□□□□□ -0.62
CPNE1-201ENST00000317677 FCGR2AP12318 317 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 ERVFRD-1P60508 538 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 OR8B8Q15620 311 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 P4HA3Q7Z4N8 544 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 HOGA1Q86XE5 327 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 ZNF101Q8IZC7 436 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 SUMF2Q8NBJ7 301 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 FRZBQ92765 325 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 POM121L2Q96KW2 1035 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 B4DEV8 164 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 SFT2D2O95562 160 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 AKR1C4P17516 323 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 ALDH3B1P43353 468 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM242Q9NWH2 141 aa11.17□□□□□ -0.62
CPNE1-201ENST00000317677 PUS1Q9Y606 427 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPNE1-201ENST00000317677 BAHCC1Q9P281 2608 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 C5orf49A4QMS7 147 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 H3BQ15 152 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 SOCS1O15524 211 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 CYB5BO43169 146 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 MPIG6BO95866 241 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 IGHV1-2P23083 117 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 KIR2DL2P43627 348 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM50BP56557 158 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 ACSF3Q4G176 576 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 PLAC9Q5JTB6 97 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 PCSK4Q6UW60 755 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 MYPOPQ86VE0 399 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 RAB39BQ96DA2 213 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 GPER1Q99527 375 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 GAL3ST2Q9H3Q3 398 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 GAB2Q9UQC2 676 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 MEMO1Q9Y316 297 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 SPTA1P02549 2419 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 GTF3C1Q12789 2109 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 FOXI3A8MTJ6 420 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 NGFP01138 241 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 AMBPP02760 352 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 PRB1P04280 392 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 GNB3P16520 340 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 CCNOP22674 350 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 RPL12P30050 165 aaKnown RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 WNT5AP41221 380 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 FOXF2Q12947 444 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 RAB32Q13637 225 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 VWA1Q6PCB0 445 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 SEM1Q6ZVN7 128 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 FAM214BQ7L5A3 538 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 MDP1Q86V88 176 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 THNSL2Q86YJ6 484 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 OR8G5Q8NG78 346 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 SARAFQ96BY9 339 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 GINS3Q9BRX5 216 aa11.16□□□□□ -0.62
CPNE1-201ENST00000317677 FGF23Q9GZV9 251 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-201ENST00000317677 TGIF2-C20orf24A0A0A6YYL0 155 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 ZNF727A8MUV8 499 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 XRCC2O43543 280 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 RAD51DO75771 328 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 OR13C7P0DN81 318 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 APLNRP35414 380 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 ARR3P36575 388 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 RND2P52198 227 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 LY6DQ14210 128 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 SLC22A6Q4U2R8 563 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 FJX1Q86VR8 437 aa11.15□□□□□ -0.62
CPNE1-201ENST00000317677 NAXEQ8NCW5 288 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms