RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MS4A15Q8N5U1 240 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 SELENOIQ9C0D9 397 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 IGHV1-3A0A0C4DH29 117 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 CRTAPO75718 401 aaPredicted RBP14.1□□□□□ -0.15
TPM1-203ENST00000317516 MGMTP16455 207 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 FUT3P21217 361 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 LOXL3P58215 753 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 RNLSQ5VYX0 342 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 C5orf56Q8N8D9 126 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 CHPT1Q8WUD6 406 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 TFAP2CQ92754 450 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 MND1Q9BWT6 205 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 BANF2Q9H503 90 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 DCLRE1BQ9H816 532 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 NECAP2Q9NVZ3 263 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 SCN3BQ9NY72 215 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 GNG12Q9UBI6 72 aa14.1□□□□□ -0.15
TPM1-203ENST00000317516 SERPINE3A8MV23 424 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 PIN1P1O15428 100 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 GPR50Q13585 617 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 EBI3Q14213 229 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 OR2T10Q8NGZ9 312 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 OR4K15Q8NH41 348 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 UBALD1Q8TB05 177 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 CST11Q9H112 138 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 FKBP14Q9NWM8 211 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 KCNIP1Q9NZI2 227 aa14.09□□□□□ -0.15
TPM1-203ENST00000317516 IGHV3-43A0A0B4J1X8 118 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 NCBP2LA6PVI3 153 aaKnown RBP14.08□□□□□ -0.16
TPM1-203ENST00000317516 C12orf77C9JDV5 145 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 PTGES3LE9PB15 166 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 TXNL1O43396 289 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 CDK1P06493 297 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 UBBP0CG47 229 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 IGHV3-43DP0DP04 118 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 CD1BP29016 333 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 REG1BP48304 166 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 SLC35A2P78381 396 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 SLC35B1P78383 322 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 ACSM3Q53FZ2 586 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 STEAP3Q658P3 488 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 GLT8D1Q68CQ7 371 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 SLC35E3Q7Z769 313 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 LYPD6Q86Y78 171 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 FOXRED2Q8IWF2 684 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 GAPTQ8N292 157 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 PRR18Q8N4B5 295 aa14.08□□□□□ -0.16
TPM1-203ENST00000317516 EAF1Q96JC9 268 aaPredicted RBP14.08□□□□□ -0.16
TPM1-203ENST00000317516 CMYA5Q8N3K9 4069 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 H0YHG0 523 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 SC5DO75845 299 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 DUS4LO95620 317 aaKnown RBP14.07□□□□□ -0.16
TPM1-203ENST00000317516 HBZP02008 142 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 GABPB1Q06547 395 aaPredicted RBP14.07□□□□□ -0.16
TPM1-203ENST00000317516 SPHARQ15513 63 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 C6orf141Q5SZD1 244 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 UNQ9370/PRO34162Q6UXP9 181 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 ZNF554Q86TJ5 538 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 TGIF2LXQ8IUE1 241 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 IZUMO1Q8IYV9 350 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 COMMD1Q8N668 190 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 TMEM104Q8NE00 496 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 OR51D1Q8NGF3 324 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 RTN4IP1Q8WWV3 396 aaPredicted RBP14.07□□□□□ -0.16
TPM1-203ENST00000317516 ST6GALNAC6Q969X2 333 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 PHF21AQ96BD5 680 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 Q96M66 194 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 GON7Q9BXV9 100 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 LRRC42Q9Y546 428 aa14.07□□□□□ -0.16
TPM1-203ENST00000317516 IGHV3-72A0A0B4J1Y9 119 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 UBE2QL1A1L167 161 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 PDCD6O75340 191 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 MOSP00540 346 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 IGHG2P01859 326 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 PRB2P02812 416 aaPredicted RBP14.06□□□□□ -0.16
TPM1-203ENST00000317516 C10orf99Q6UWK7 81 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 SLC25A48Q6ZT89 311 aaKnown RBP14.06□□□□□ -0.16
TPM1-203ENST00000317516 ZNF329Q86UD4 541 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 OR8H1Q8NGG4 311 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 PHYHIPQ92561 330 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 RCC1LQ96I51 464 aaKnown RBP14.06□□□□□ -0.16
TPM1-203ENST00000317516 NEDD4LQ96PU5 975 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 TAF9BQ9HBM6 251 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 OR2S2Q9NQN1 319 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 ZFP57Q9NU63 452 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 PLXNB1O43157 2135 aa14.06□□□□□ -0.16
TPM1-203ENST00000317516 IGLL1P15814 213 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 RCC1P18754 421 aaPredicted RBP14.05□□□□□ -0.16
TPM1-203ENST00000317516 SLC6A1P30531 599 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 ZNF137PP52743 207 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 CT45A1Q5HYN5 189 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 OR10V1Q8NGI7 309 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 OR1L1Q8NH94 360 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 CT45A3Q8NHU0 189 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 MRAPQ8TCY5 172 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 NOL4LQ96MY1 436 aaPredicted RBP14.05□□□□□ -0.16
TPM1-203ENST00000317516 TMED9Q9BVK6 235 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 ABCG5Q9H222 651 aa14.05□□□□□ -0.16
TPM1-203ENST00000317516 MBNL3Q9NUK0 354 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms