RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 HSPB6O14558 160 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 ADCYAP1P18509 176 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 TSC22D1Q15714 1073 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 GUCA2BQ16661 112 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 Q6ZRG5 221 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 COMMD1Q8N668 190 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 NRIP2Q9BQI9 281 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 GINS3Q9BRX5 216 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 OPN3Q9H1Y3 402 aaPredicted RBP12.03□□□□□ -0.48
VRK3-201ENST00000316763 TMEM231Q9H6L2 316 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 IL36RNQ9UBH0 155 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 PURGQ9UJV8 347 aaKnown RBP12.03□□□□□ -0.48
VRK3-201ENST00000316763 ESPL1Q14674 2120 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 NKX2-6A6NCS4 301 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 J3QT63 122 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
VRK3-201ENST00000316763 NKX2-1P43699 371 aaPredicted RBP12.03□□□□□ -0.48
VRK3-201ENST00000316763 RAB5CP51148 216 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 FAM76BQ5HYJ3 339 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 OR2T2Q6IF00 324 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 ZNF818PQ6ZRF7 136 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 SELENOHQ8IZQ5 122 aaKnown RBP12.03□□□□□ -0.48
VRK3-201ENST00000316763 GAPTQ8N292 157 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 MRPL30Q8TCC3 161 aaKnown RBP12.03□□□□□ -0.48
VRK3-201ENST00000316763 RTL8AQ9BWD3 113 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 OR51B6Q9H340 312 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 IFT22Q9H7X7 185 aa12.03□□□□□ -0.48
VRK3-201ENST00000316763 TRGV8A0A0C4DH27 118 aa12.02□□□□□ -0.49
VRK3-201ENST00000316763 CA6P23280 308 aa12.02□□□□□ -0.49
VRK3-201ENST00000316763 DVL1P1P54792 670 aaPredicted RBP12.02□□□□□ -0.49
VRK3-201ENST00000316763 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.49
VRK3-201ENST00000316763 KIRREL1Q96J84 757 aa12.02□□□□□ -0.49
VRK3-201ENST00000316763 TLNRD1Q9H1K6 362 aa12.02□□□□□ -0.49
VRK3-201ENST00000316763 OR51I2Q9H344 312 aa12.02□□□□□ -0.49
VRK3-201ENST00000316763 CDH20Q9HBT6 801 aa12.02□□□□□ -0.49
VRK3-201ENST00000316763 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.49
VRK3-201ENST00000316763 HSD17B6O14756 317 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 HS3ST1O14792 307 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 DEGS1O15121 323 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 TSPAN15O95858 294 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 MDH2P40926 338 aaKnown RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 CA7P43166 264 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 UBE2NP61088 152 aaKnown RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 VAMP2P63027 116 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 HERPUD1Q15011 391 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 ZNF474Q6S9Z5 364 aaPredicted RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 CLEC9AQ6UXN8 241 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 CXorf67Q86X51 503 aaPredicted RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 Q8IYB0 196 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 OR2C3Q8N628 320 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 WDR31Q8NA23 367 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 DMBX1Q8NFW5 382 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 OR10J5Q8NHC4 309 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 LYPD6BQ8NI32 183 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 RDH5Q92781 318 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 IL22RA2Q969J5 263 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 SLC25A31Q9H0C2 315 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 WFDC1Q9HC57 220 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 FAM96BQ9Y3D0 163 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 INTS1Q8N201 2190 aaKnown RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 IGKV1D-13A0A0B4J2D9 117 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 LILRA1O75019 489 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 CD5P06127 495 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 DANCRP0C864 163 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 IGKV1-13P0DP09 117 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 SPP1P10451 314 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 ZNF44P15621 663 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 ZNF14P17017 642 aaPredicted RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 GNLYP22749 145 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 UCP1P25874 307 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 CASP6P55212 293 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 HLA-DRB3P79483 266 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 ZNF880Q6PDB4 577 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 OR5D13Q8NGL4 314 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 BSCL2Q96G97 398 aaPredicted RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 ZNF488Q96MN9 340 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
VRK3-201ENST00000316763 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 ZDHHC8Q9ULC8 765 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 POLDIP2Q9Y2S7 368 aa12.01□□□□□ -0.49
VRK3-201ENST00000316763 IGKV1-6A0A0C4DH72 117 aa12□□□□□ -0.49
VRK3-201ENST00000316763 A0A0G2JNJ9 132 aa12□□□□□ -0.49
VRK3-201ENST00000316763 LRP5LA4QPB2 252 aa12□□□□□ -0.49
VRK3-201ENST00000316763 H0Y980 276 aa12□□□□□ -0.49
VRK3-201ENST00000316763 SFTA3P0C7M3 94 aa12□□□□□ -0.49
VRK3-201ENST00000316763 MMP9P14780 707 aa12□□□□□ -0.49
VRK3-201ENST00000316763 VDAC1P21796 283 aa12□□□□□ -0.49
VRK3-201ENST00000316763 UQCRFS1P47985 274 aa12□□□□□ -0.49
VRK3-201ENST00000316763 CAMLGP49069 296 aa12□□□□□ -0.49
VRK3-201ENST00000316763 EWSR1Q01844 656 aaKnown RBP eCLIP12□□□□□ -0.49
VRK3-201ENST00000316763 NHLH2Q02577 135 aa12□□□□□ -0.49
VRK3-201ENST00000316763 ZNF266Q14584 549 aa12□□□□□ -0.49
VRK3-201ENST00000316763 SPATA46Q5T0L3 261 aa12□□□□□ -0.49
VRK3-201ENST00000316763 DHRS7BQ6IAN0 325 aaPredicted RBP12□□□□□ -0.49
VRK3-201ENST00000316763 MOB1BQ7L9L4 216 aa12□□□□□ -0.49
VRK3-201ENST00000316763 PLEKHF2Q9H8W4 249 aa12□□□□□ -0.49
VRK3-201ENST00000316763 OBP2BQ9NPH6 170 aa12□□□□□ -0.49
VRK3-201ENST00000316763 CCL28Q9NRJ3 127 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms