RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 WFDC9Q8NEX5 89 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 OR4K15Q8NH41 348 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 RCC1LQ96I51 464 aaKnown RBP10.1□□□□□ -0.79
CKS2-201ENST00000314355 NEDD4LQ96PU5 975 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 UQCC2Q9BRT2 126 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 MND1Q9BWT6 205 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 ZFP57Q9NU63 452 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 GFOD1Q9NXC2 390 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
CKS2-201ENST00000314355 PSORS1C1Q9UIG5 152 aa10.1□□□□□ -0.79
CKS2-201ENST00000314355 IGHV3-43A0A0B4J1X8 118 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 SH2D7A6NKC9 451 aaPredicted RBP10.09□□□□□ -0.79
CKS2-201ENST00000314355 NUDT19A8MXV4 375 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 PTGES3LE9PB15 166 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 PIN1P1O15428 100 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
CKS2-201ENST00000314355 RGS11O94810 467 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 UBBP0CG47 229 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 IGHV3-43DP0DP04 118 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 MGMTP16455 207 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 CD1BP29016 333 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 SLC6A1P30531 599 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 STEAP3Q658P3 488 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 TGIF2LXQ8IUE1 241 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 OR8H1Q8NGG4 311 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 PGLYRP3Q96LB9 341 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 DERL3Q96Q80 235 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 MCRIP2Q9BUT9 160 aaKnown RBP10.09□□□□□ -0.79
CKS2-201ENST00000314355 BANF2Q9H503 90 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 DCLRE1BQ9H816 532 aa10.09□□□□□ -0.79
CKS2-201ENST00000314355 TRAV8-7A0A075B6U6 113 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 TRBV5-7A0A0A0MS05 114 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 A0A1W2PP11 408 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 A0A1W2PPI3 338 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 UBE2QL1A1L167 161 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 C15orf65H3BRN8 121 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 AP4M1O00189 453 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 PLXNB1O43157 2135 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 MOSP00540 346 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 REG1BP48304 166 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 RPS11P62280 158 aaKnown RBP eCLIP10.08□□□□□ -0.8
CKS2-201ENST00000314355 GABPB1Q06547 395 aaPredicted RBP10.08□□□□□ -0.8
CKS2-201ENST00000314355 ACSM3Q53FZ2 586 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 OGFRL1Q5TC84 451 aaPredicted RBP10.08□□□□□ -0.8
CKS2-201ENST00000314355 TEX38Q6PEX7 206 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 UNQ9370/PRO34162Q6UXP9 181 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 ZNF329Q86UD4 541 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 C5orf56Q8N8D9 126 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 EAF1Q96JC9 268 aaPredicted RBP10.08□□□□□ -0.8
CKS2-201ENST00000314355 OR2S2Q9NQN1 319 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
CKS2-201ENST00000314355 ABRACLQ9P1F3 81 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 TPRKBQ9Y3C4 175 aa10.08□□□□□ -0.8
CKS2-201ENST00000314355 MEGF8Q7Z7M0 2845 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 H0YHG0 523 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 CASQ2O14958 399 aaPredicted RBP10.07□□□□□ -0.8
CKS2-201ENST00000314355 PRB2P02812 416 aaPredicted RBP10.07□□□□□ -0.8
CKS2-201ENST00000314355 AMY1AP04745 511 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 AMY2AP04746 511 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 IGLL1P15814 213 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 EBI3Q14213 229 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 DIAPH2-AS1Q14236 149 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 MED22Q15528 200 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 PNLIPRP3Q17RR3 467 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 NKAPLQ5M9Q1 402 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 RBM48Q5RL73 367 aaKnown RBP10.07□□□□□ -0.8
CKS2-201ENST00000314355 ZNF554Q86TJ5 538 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 ZNF485Q8NCK3 441 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 UBALD1Q8TB05 177 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 RTN4IP1Q8WWV3 396 aaPredicted RBP10.07□□□□□ -0.8
CKS2-201ENST00000314355 TFAP2CQ92754 450 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 PHF21AQ96BD5 680 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 GALMQ96C23 342 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 TAF9BQ9HBM6 251 aa10.07□□□□□ -0.8
CKS2-201ENST00000314355 RCC2Q9P258 522 aaKnown RBP10.07□□□□□ -0.8
CKS2-201ENST00000314355 IGHV3-72A0A0B4J1Y9 119 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 MAGEA13PA6NCF6 341 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 C12orf77C9JDV5 145 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 MPIG6BO95866 241 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 IGHG2P01859 326 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 HBZP02008 142 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 CDK1P06493 297 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 GNAO1P09471 354 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 SRMP19623 302 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 SPHARQ15513 63 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 HSD17B12Q53GQ0 312 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 DEFB121Q5J5C9 76 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 CXorf66Q5JRM2 361 aaPredicted RBP10.06□□□□□ -0.8
CKS2-201ENST00000314355 C6orf141Q5SZD1 244 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 UTF1Q5T230 341 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 FOXB2Q5VYV0 432 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 RNLSQ5VYX0 342 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 SLC25A48Q6ZT89 311 aaKnown RBP10.06□□□□□ -0.8
CKS2-201ENST00000314355 IZUMO1Q8IYV9 350 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 STPG2Q8N412 459 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 OR10V1Q8NGI7 309 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 KCNG3Q8TAE7 436 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 FAM46BQ96A09 425 aa10.06□□□□□ -0.8
CKS2-201ENST00000314355 TMED9Q9BVK6 235 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms