RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 LURAP1LQ8IV03 231 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 RBMXL3Q8N7X1 1067 aaKnown RBP10.54□□□□□ -0.72
RNF4-201ENST00000314289 Q8NFD4 153 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 NAA60Q9H7X0 242 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 ZNF71Q9NQZ8 489 aaPredicted RBP10.54□□□□□ -0.72
RNF4-201ENST00000314289 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 PROCRQ9UNN8 238 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 CHD3Q12873 2000 aaKnown RBP10.54□□□□□ -0.72
RNF4-201ENST00000314289 NXPH2O95156 264 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 NXPH3O95157 252 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 GNRHRP30968 328 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 NUBP1P53384 320 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 ZNF616Q08AN1 781 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 OR8G1Q15617 311 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 MOB3AQ96BX8 217 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 RTL8AQ9BWD3 113 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 OPA3Q9H6K4 179 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 PLSCR2Q9NRY7 297 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 DECR2Q9NUI1 292 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
RNF4-201ENST00000314289 MED19A0JLT2 244 aaPredicted RBP10.53□□□□□ -0.72
RNF4-201ENST00000314289 MLNRO43193 412 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 CD5P06127 495 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 EIF2S3P41091 472 aaKnown RBP10.53□□□□□ -0.72
RNF4-201ENST00000314289 ZNF83P51522 516 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 ADAM5Q6NVV9 412 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 INO80CQ6PI98 192 aaPredicted RBP10.53□□□□□ -0.72
RNF4-201ENST00000314289 VHLLQ6RSH7 139 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 ZNF818PQ6ZRF7 136 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 SAXO1Q8IYX7 474 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 KCNIP3Q9Y2W7 256 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 AMDHD2Q9Y303 409 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 J3QT63 122 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 UBE2CO00762 179 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 SLC34A2O95436 690 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 TK1P04183 234 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 ARG1P05089 322 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 PET100P0DJ07 73 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 DVL1P1P54792 670 aaPredicted RBP10.53□□□□□ -0.72
RNF4-201ENST00000314289 IL24Q13007 206 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 TMEM187Q14656 261 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 FAM53AQ6NSI3 398 aaPredicted RBP10.53□□□□□ -0.72
RNF4-201ENST00000314289 BTNL8Q6UX41 500 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 DPPA2Q7Z7J5 298 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 GAPTQ8N292 157 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 MRPL30Q8TCC3 161 aaKnown RBP10.53□□□□□ -0.72
RNF4-201ENST00000314289 GTF3AQ92664 365 aaKnown RBP10.53□□□□□ -0.72
RNF4-201ENST00000314289 CCL28Q9NRJ3 127 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 FBXL17Q9UF56 701 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 DUSP13Q9UII6 198 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 FAM215AQ9Y5M1 114 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 NCOR2Q9Y618 2525 aa10.53□□□□□ -0.72
RNF4-201ENST00000314289 C7orf77A4D0Y5 90 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 TSPAN15O95858 294 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 OR2H2O95918 312 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 IGKV3-15P01624 115 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 HKR1P10072 659 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 FOLR2P14207 255 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 EIF5AP63241 154 aaKnown RBP10.52□□□□□ -0.72
RNF4-201ENST00000314289 MPV17LQ2QL34 196 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 FAM24BQ8N5W8 94 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 PLPPR1Q8TBJ4 325 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 BCL2L14Q9BZR8 327 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 EIF5A2Q9GZV4 153 aaKnown RBP10.52□□□□□ -0.72
RNF4-201ENST00000314289 SPACA1Q9HBV2 294 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 OR1A1Q9P1Q5 309 aa10.52□□□□□ -0.72
RNF4-201ENST00000314289 AHRRA9YTQ3 701 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 K7EPK0 472 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 TIMM8AO60220 97 aaPredicted RBP10.52□□□□□ -0.73
RNF4-201ENST00000314289 COX5AP20674 150 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 RPL12P30050 165 aaKnown RBP10.52□□□□□ -0.73
RNF4-201ENST00000314289 SULT1A2P50226 295 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 ZNF561Q8N587 486 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 FAM71E2Q8N5Q1 922 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
RNF4-201ENST00000314289 PLSCR4Q9NRQ2 329 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 IGHV1-18A0A0C4DH31 117 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 IFNA21P01568 189 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 MIDNQ504T8 468 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 NCMAPQ5T1S8 102 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 Q6ZR03 302 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 TBC1D26Q86UD7 250 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 CD300LFQ8TDQ1 290 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 ABHD17AQ96GS6 310 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 KPTNQ9Y664 436 aa10.52□□□□□ -0.73
RNF4-201ENST00000314289 TRDCB7Z8K6 153 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 CLN5O75503 358 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 MT-ND4LP03901 98 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 RAC2P15153 192 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 IL15RAQ13261 267 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 TMEM268Q5VZI3 342 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 ZNF474Q6S9Z5 364 aaPredicted RBP10.51□□□□□ -0.73
RNF4-201ENST00000314289 Q6ZS92 163 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 C22orf34Q6ZV56 151 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 LRP11Q86VZ4 500 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 TPRX1Q8N7U7 411 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 SLC35G3Q8N808 338 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms