RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CD300LBA8K4G0 201 aa11.83□□□□□ -0.51
MKS1-201ENST00000313863 KLF7O75840 302 aaPredicted RBP11.83□□□□□ -0.51
MKS1-201ENST00000313863 C9orf152Q5JTZ5 239 aa11.83□□□□□ -0.51
MKS1-201ENST00000313863 S100PBPQ96BU1 408 aa11.83□□□□□ -0.51
MKS1-201ENST00000313863 UFSP2Q9NUQ7 469 aa11.83□□□□□ -0.51
MKS1-201ENST00000313863 PITPNC1Q9UKF7 332 aa11.83□□□□□ -0.51
MKS1-201ENST00000313863 IGKV1-6A0A0C4DH72 117 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 CCDC163A0A0D9SF12 145 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 ZFP92A6NM28 416 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 TSTD3H0UI37 97 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 SYNGR2O43760 224 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 CXCL12P48061 93 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 PKIAP61925 76 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 TMEM41BQ5BJD5 291 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 LYSMD4Q5XG99 296 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 ZNF324BQ6AW86 544 aaPredicted RBP11.83□□□□□ -0.52
MKS1-201ENST00000313863 MOB1BQ7L9L4 216 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
MKS1-201ENST00000313863 MRPL30Q8TCC3 161 aaKnown RBP11.83□□□□□ -0.52
MKS1-201ENST00000313863 CABLES2Q9BTV7 478 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 SDF2L1Q9HCN8 221 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 NCKAP5O14513 1909 aa11.83□□□□□ -0.52
MKS1-201ENST00000313863 NPIPB11E5RHQ5 1161 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 MRPL33O75394 65 aaKnown RBP11.82□□□□□ -0.52
MKS1-201ENST00000313863 TRAPPC6AO75865 159 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 NXPH3O95157 252 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 MDH2P40926 338 aaKnown RBP11.82□□□□□ -0.52
MKS1-201ENST00000313863 TMEM267Q0VDI3 215 aaPredicted RBP11.82□□□□□ -0.52
MKS1-201ENST00000313863 PCSK4Q6UW60 755 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 BATF2Q8N1L9 274 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 GPR61Q9BZJ8 451 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 PSENENQ9NZ42 101 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 MTCH1Q9NZJ7 389 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 SDK2Q58EX2 2172 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 SMCO3A2RU48 225 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 TNFSF12O43508 249 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 SOD3P08294 240 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 ZNF573Q86YE8 665 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 ZNF525Q8N782 197 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 OR10V1Q8NGI7 309 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 OR5R1Q8NH85 324 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 IFI44Q8TCB0 444 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 CA5BP1Q8WTZ4 195 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 FRZBQ92765 325 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 AGMATQ9BSE5 352 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 LIN7CQ9NUP9 197 aaKnown RBP11.82□□□□□ -0.52
MKS1-201ENST00000313863 WNT16Q9UBV4 365 aa11.82□□□□□ -0.52
MKS1-201ENST00000313863 TRIOO75962 3097 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 IGKV3D-15A0A087WSY6 115 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 OR5B21A6NL26 309 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 KIAA1324LA8MWY0 1029 aaPredicted RBP11.81□□□□□ -0.52
MKS1-201ENST00000313863 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
MKS1-201ENST00000313863 PSG2P11465 335 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 PAX1P15863 534 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 ARF1P84077 181 aaKnown RBP11.81□□□□□ -0.52
MKS1-201ENST00000313863 ZNF468Q5VIY5 522 aaPredicted RBP11.81□□□□□ -0.52
MKS1-201ENST00000313863 LCN15Q6UWW0 184 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 GPHA2Q96T91 129 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 PRDM13Q9H4Q3 707 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 ZNF665Q9H7R5 613 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 CACNG5Q9UF02 275 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
MKS1-201ENST00000313863 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 FAM90A26D6RGX4 464 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 H3BP45 60 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 HLA-HP01893 362 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 RD3LP0DJH9 198 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 APLNRP35414 380 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 WIPI1Q5MNZ9 446 aaPredicted RBP11.8□□□□□ -0.52
MKS1-201ENST00000313863 OR10A7Q8NGE5 316 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 ABHD5Q8WTS1 349 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 RSG1Q9BU20 258 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 STRADBQ9C0K7 418 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 ERRFI1Q9UJM3 462 aaPredicted RBP11.8□□□□□ -0.52
MKS1-201ENST00000313863 MPC1Q9Y5U8 109 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 A0A0G2JMM0 328 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 A0A1W2PPB8 328 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 A0A1W2PRS3 328 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 C5orf49A4QMS7 147 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 MAP1LC3B2A6NCE7 125 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 LRRC3CA6NJW4 275 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 ANKRD30BLA7E2S9 258 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 RNF212BA8MTL3 300 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 KIR3DP1A8MWS1 328 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 K7ESF4 209 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 HSPB6O14558 160 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 FABP4P15090 132 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 CCNOP22674 350 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 IGFBP4P22692 258 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 GDF1P27539 372 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 ARR3P36575 388 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 CDCP2Q5VXM1 449 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 ZNF295-AS1Q8N0V1 137 aa11.8□□□□□ -0.52
MKS1-201ENST00000313863 ABHD3Q8WU67 409 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms