RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CFDP00746 253 aaPredicted RBP13.66□□□□□ -0.22
HCFC1-201ENST00000310441 NSUN5P2Q63ZY6 315 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 OR5M9Q8NGP3 310 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 PPP1R17O96001 155 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 SFTPCP11686 197 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 CDX1P47902 265 aaPredicted RBP13.66□□□□□ -0.22
HCFC1-201ENST00000310441 GABRA6Q16445 453 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 C16orf82Q7Z2V1 217 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 SYNGR1O43759 233 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF117Q03924 483 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 LRRC75BQ2VPJ9 315 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF502Q8TBZ5 544 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 CNRIP1Q96F85 164 aaPredicted RBP13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ABHD14BQ96IU4 210 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 HIST1H4GQ99525 98 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 PTPRFP10586 1907 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 LOC107984156A0A0G2JMH3 177 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 TMEM78Q5T7P6 136 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ARL17AQ8IVW1 177 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF683Q8IZ20 524 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 PRELID3AQ96N28 172 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 SEC11BP0C7V7 166 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 HERPUD1Q15011 391 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF324O75467 553 aaPredicted RBP13.66□□□□□ -0.22
HCFC1-201ENST00000310441 IER3P46695 156 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 H3BQ15 152 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 PTX4Q96A99 478 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 LRRC61Q9BV99 259 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 RAB29O14966 203 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 Q6ZNB5 142 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 TMEM136Q6ZRR5 245 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 TMIGD3P0DMS9 266 aaPredicted RBP13.65□□□□□ -0.22
HCFC1-201ENST00000310441 WDR34Q96EX3 536 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 PPYP01298 95 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 DNLZQ5SXM8 178 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 P2RX4Q99571 388 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 SPNP16150 400 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 GALNSP34059 522 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 LTB4R2Q9NPC1 389 aa13.65□□□□□ -0.22
HCFC1-201ENST00000310441 SPTY2D1-AS1A0A0U1RR47 76 aa13.65□□□□□ -0.23
HCFC1-201ENST00000310441 ZXDAP98168 799 aa13.65□□□□□ -0.23
HCFC1-201ENST00000310441 ZNF519Q8TB69 540 aa13.65□□□□□ -0.23
HCFC1-201ENST00000310441 UBTD1Q9HAC8 227 aa13.65□□□□□ -0.23
HCFC1-201ENST00000310441 CCL7P80098 99 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 CLN8Q9UBY8 286 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 ETHE1O95571 254 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 TSPAN13O95857 204 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 COX7A1P24310 79 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PSMG4Q5JS54 123 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 OR4A5Q8NH83 315 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 NUDT8Q8WV74 236 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 ELOVL1Q9BW60 279 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PLPPR5Q32ZL2 321 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 ABHD1Q96SE0 405 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PAXXQ9BUH6 204 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 CHST1O43916 411 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PMELP40967 661 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 GFERP55789 205 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 TM4SF20Q53R12 229 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 ZNF665Q9H7R5 613 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PRRT4C9JH25 899 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 ROM1Q03395 351 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 GUCD1Q96NT3 240 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 MSL2Q9HCI7 577 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PHLDA3Q9Y5J5 127 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 C3orf80F5H4A9 247 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 IFNL4K9M1U5 179 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 NUDT3O95989 172 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 CKS2P33552 79 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 ZG16BQ96DA0 208 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
HCFC1-201ENST00000310441 PRICKLE4Q2TBC4 344 aa13.64□□□□□ -0.23
HCFC1-201ENST00000310441 CEACAM5P06731 702 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 LGALS3P17931 250 aaKnown RBP13.63□□□□□ -0.23
HCFC1-201ENST00000310441 C10orf126Q8N4M7 172 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 FAM131CQ96AQ9 280 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 PTPRDP23468 1912 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 LEUTXA8MZ59 168 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 K7N7A8 449 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 BCL2P10415 239 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 NAAAQ02083 359 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 XAF1Q6GPH4 301 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 MAP1LC3AQ9H492 121 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 TCF24Q7RTU0 167 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 PRR35P0CG20 571 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 FMODQ06828 376 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 MRPL58Q14197 206 aaKnown RBP13.63□□□□□ -0.23
HCFC1-201ENST00000310441 ACER2Q5QJU3 275 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 FAM222BQ8WU58 562 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 LINC00052Q96N35 136 aa13.63□□□□□ -0.23
HCFC1-201ENST00000310441 ALKBH7Q9BT30 221 aaPredicted RBP13.62□□□□□ -0.23
HCFC1-201ENST00000310441 SCNM1Q9BWG6 230 aa13.62□□□□□ -0.23
HCFC1-201ENST00000310441 HTN1P15515 57 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms