RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TMEM78Q5T7P6 136 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 C12orf73Q69YU5 71 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 LIAT1Q6ZQX7 453 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF429Q86V71 674 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 GLCCI1Q86VQ1 547 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 COMMD7Q86VX2 200 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 BPIFA4PQ86YQ2 179 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 BMPERQ8N8U9 685 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 MISP3Q96FF7 219 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 FOXN4Q96NZ1 517 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 GPR35Q9HC97 309 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 MRPL22Q9NWU5 206 aaKnown RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 CDC42EP3Q9UKI2 254 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 DSPPQ9NZW4 1301 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 HMX2A2RU54 273 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 J3QR06 171 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ISLRO14498 428 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 CTDSP2O14595 271 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 MPV17P39210 176 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ZIC4Q8N9L1 334 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 OR52M1Q8NGK5 317 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 LIN28AQ9H9Z2 209 aaKnown RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF835Q9Y2P0 537 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 WSB1Q9Y6I7 421 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 PRR14LQ5THK1 2151 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM238LA0A1B0GVL6 79 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 A6NJY4 79 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 C3orf80F5H4A9 247 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 CLDN20P56880 219 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 POLR2GP62487 172 aaKnown RBP eCLIP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 HLA-DRB3P79483 266 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 FAM3AP98173 230 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ROM1Q03395 351 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 GPNMBQ14956 572 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 LRRC75BQ2VPJ9 315 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM97Q5BJF2 176 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 C11orf87Q6NUJ2 197 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 OR5T1Q8NG75 326 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 OR4X2Q8NGF9 303 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 OR52I2Q8NH67 350 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ABHD14AQ9BUJ0 271 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 NXF2Q9GZY0 626 aaKnown RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ALX4Q9H161 411 aaPredicted RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 PPYP01298 95 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 SLC6A1P30531 599 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 RPS19P39019 145 aaKnown RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 RPL8P62917 257 aaKnown RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 HERPUD1Q15011 391 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 SIGIRRQ6IA17 410 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 PTPMT1Q8WUK0 201 aaPredicted RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 SEC22AQ96IW7 307 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 OR2H1Q9GZK4 316 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 TOLLIPQ9H0E2 274 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 COA4Q9NYJ1 87 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 DLL3Q9NYJ7 618 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 TEX50A0A1B0GTY4 177 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF729A6NN14 1252 aaPredicted RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 CDRT15L2A8MXV6 281 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 TSPAN2O60636 221 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 NDUFB6O95139 128 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 IGHA1P01876 353 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 IGHA2P01877 340 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 INHBBP09529 407 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 COL9A1P20849 921 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 PRDX2P32119 198 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 MFAP4P55083 255 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 PSG9Q00887 426 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF90Q03938 601 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 GGTLC2Q14390 218 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 PCNPQ8WW12 178 aaKnown RBP2.79□□□□□ -1.96
CLOCK-201ENST00000309964 SLC25A28Q96A46 364 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 AUNIPQ9H7T9 357 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 NOTCH4Q99466 2003 aa2.79□□□□□ -1.96
CLOCK-201ENST00000309964 LTBP1Q14766 1721 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ABCA2Q9BZC7 2435 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 NDUFS8O00217 210 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CDIPTO14735 213 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OPN1MWP04001 364 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OPN1MW2P0DN77 364 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OPN1MW3P0DN78 364 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MAGEB1P43366 347 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CDC34P49427 236 aaPredicted RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CFHR1Q03591 330 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF816Q0VGE8 651 aaPredicted RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SPATA46Q5T0L3 261 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SLC35E3Q7Z769 313 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SLC25A45Q8N413 288 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR2C3Q8N628 320 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ADAD2Q8NCV1 583 aaKnown RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR8B12Q8NGG6 310 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 FAM57AQ8TBR7 257 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF721Q8TF20 911 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 IL22RA2Q969J5 263 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 R3HDM4Q96D70 268 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MYEOVQ96EZ4 313 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MMP28Q9H239 520 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SPAARA0A1B0GVQ0 90 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 AGPAT2O15120 278 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CTAG2O75638 210 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms