RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PET100P0DJ07 73 aa17.83■□□□□ 0.44
ATG4D-201ENST00000309469 UBE2J1Q9Y385 318 aaPredicted RBP17.83■□□□□ 0.44
ATG4D-201ENST00000309469 IGKV1D-17A0A075B6S4 117 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 OOEPA6NGQ2 149 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 ATXN7O15265 892 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-201ENST00000309469 PGLYRP1O75594 196 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-201ENST00000309469 GABRA2P47869 451 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 ASCL1P50553 236 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 LUMP51884 338 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-201ENST00000309469 KRBOX4Q5JUW0 171 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 MEX3BQ6ZN04 569 aaKnown RBP17.82■□□□□ 0.44
ATG4D-201ENST00000309469 BVESQ8NE79 360 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 LILRB1Q8NHL6 650 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-201ENST00000309469 ST8SIA2Q92186 375 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 GPHA2Q96T91 129 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 NGBQ9NPG2 151 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 C12orf77C9JDV5 145 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 ZNF737O75373 536 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 OR4A8P0C604 315 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 TNFSF4P23510 183 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 S100A10P60903 97 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 ADIPOQQ15848 244 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 TMEM268Q5VZI3 342 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 UNQ6494/PRO21346Q6UXR6 183 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 COMMD7Q86VX2 200 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 FAM219AQ8IW50 185 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 ZCCHC14Q8WYQ9 949 aaKnown RBP17.82■□□□□ 0.44
ATG4D-201ENST00000309469 RRNAD1Q96FB5 475 aaKnown RBP17.82■□□□□ 0.44
ATG4D-201ENST00000309469 TMEM56Q96MV1 263 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 CNTNAP3BQ96NU0 1288 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 CNTNAP3Q9BZ76 1288 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 TMED3Q9Y3Q3 217 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 TMEM56-RWDD3S4R434 201 aa17.82■□□□□ 0.44
ATG4D-201ENST00000309469 IGHV3OR15-7A0A075B7D8 119 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 S100GP29377 79 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 CEACAM6P40199 344 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 GLIPR1P48060 266 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 SLC35G3Q8N808 338 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 OR1L1Q8NH94 360 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 GALMQ96C23 342 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 GCM1Q9NP62 436 aa17.81■□□□□ 0.44
ATG4D-201ENST00000309469 TLN1Q9Y490 2541 aaKnown RBP17.81■□□□□ 0.44
ATG4D-201ENST00000309469 CCL21O00585 134 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 TNFSF12O43508 249 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 RLN2P04090 185 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 PAX5Q02548 391 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 OR1S1Q8NH92 325 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 ARPC5LQ9BPX5 153 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 ZNF471Q9BX82 626 aaPredicted RBP17.8■□□□□ 0.44
ATG4D-201ENST00000309469 RNF7Q9UBF6 113 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 RRASP10301 218 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 NUP62P37198 522 aaPredicted RBP17.8■□□□□ 0.44
ATG4D-201ENST00000309469 ADAM5Q6NVV9 412 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 MRGPRDQ8TDS7 321 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 DNTTIP1Q9H147 329 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 PRORYQ9H606 182 aa17.8■□□□□ 0.44
ATG4D-201ENST00000309469 H0Y980 276 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 CDS2O95674 445 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 HBZP02008 142 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 NMBP08949 121 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 UCP1P25874 307 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 IL2RGP31785 369 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 ZNF695Q8IW36 515 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 FOXRED2Q8IWF2 684 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 SELENOHQ8IZQ5 122 aaKnown RBP17.79■□□□□ 0.44
ATG4D-201ENST00000309469 TPRX1Q8N7U7 411 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 KDF1Q8NAX2 398 aaPredicted RBP17.79■□□□□ 0.44
ATG4D-201ENST00000309469 ERGIC1Q969X5 290 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 AKR1E2Q96JD6 320 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 SNX22Q96L94 193 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 LURAP1Q96LR2 239 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 CADP27708 2225 aa17.79■□□□□ 0.44
ATG4D-201ENST00000309469 IGLV2-14P01704 120 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 F2RP25116 425 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 PPP1R35Q8TAP8 253 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 DIRC2Q96SL1 478 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 PARP12Q9H0J9 701 aaKnown RBP17.78■□□□□ 0.44
ATG4D-201ENST00000309469 ESRP2Q9H6T0 727 aaKnown RBP17.78■□□□□ 0.44
ATG4D-201ENST00000309469 RBM7Q9Y580 266 aaKnown RBP17.78■□□□□ 0.44
ATG4D-201ENST00000309469 F5H0A9 414 aaPredicted RBP17.78■□□□□ 0.44
ATG4D-201ENST00000309469 OR8U9P0C7N5 309 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 CHRNB4P30926 498 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 OR13A1Q8NGR1 328 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 OR8U1Q8NH10 309 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 Q8TCH9 128 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 FAM222BQ8WU58 562 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 AQP10Q96PS8 301 aa17.78■□□□□ 0.44
ATG4D-201ENST00000309469 MSGN1A6NI15 193 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 VSTM5A8MXK1 200 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 DEDDO75618 318 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 ADH4P08319 380 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 CD80P33681 288 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 EDDM3AQ14507 147 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 SMCO1Q147U7 214 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 FBXL19-AS1Q494R0 122 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 FAM201AQ5SY85 155 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 NCMAPQ5T1S8 102 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 OR5D13Q8NGL4 314 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 ANGPTL6Q8NI99 470 aa17.77■□□□□ 0.44
ATG4D-201ENST00000309469 C17orf100A8MU93 164 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms