RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 H0Y8G0 127 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF816Q0VGE8 651 aaPredicted RBP10.94□□□□□ -0.66
RETREG3-201ENST00000309428 RTP5Q14D33 572 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 TMEM164Q5U3C3 297 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 KCNIP4Q6PIL6 250 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 TIPARPQ7Z3E1 657 aaKnown RBP10.94□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF107Q9UII5 783 aaPredicted RBP10.94□□□□□ -0.66
RETREG3-201ENST00000309428 MPPED1O15442 326 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BKO60814 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BJP06899 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 LIFP15018 202 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BOP23527 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BBP33778 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 ECI1P42126 302 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BDP58876 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BCP62807 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HTD2P86397 168 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF92Q03936 586 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST2H2BEQ16778 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.94□□□□□ -0.66
RETREG3-201ENST00000309428 KMT5CQ86Y97 462 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 OR6X1Q8NH79 312 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 OR10J5Q8NHC4 309 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 CT55Q8WUE5 264 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BHQ93079 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 LYZL4Q96KX0 146 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 MS4A10Q96PG2 267 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BNQ99877 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 HIST1H2BMQ99879 126 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 PCGF1Q9BSM1 259 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 TIMM10BQ9Y5J6 103 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 USF3Q68DE3 2245 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 OTOGLQ3ZCN5 2332 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 PINLYPA6NC86 204 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 ARG2P78540 354 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 IL13RA2Q14627 380 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 PP6455Q8WZ26 134 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 CLEC18AA5D8T8 446 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF737O75373 536 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 GAPDHP04406 335 aaKnown RBP10.93□□□□□ -0.66
RETREG3-201ENST00000309428 CD5P06127 495 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 SOD3P08294 240 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 IGFBP3P17936 291 aaPredicted RBP10.93□□□□□ -0.66
RETREG3-201ENST00000309428 FUT3P21217 361 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 PTGDSP41222 190 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 STARD6P59095 220 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 DBX2Q6ZNG2 339 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 CLEC18CQ8NCF0 446 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 OR10AD1Q8NGE0 317 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 OR10A7Q8NGE5 316 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 OR2Y1Q8NGV0 311 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 NTNG2Q96CW9 530 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 ADGRG7Q96K78 797 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 TCFL5Q9UL49 500 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 HDGFL3Q9Y3E1 203 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 CHD8Q9HCK8 2581 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 NGFP01138 241 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 GRPP07492 148 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 COX6A1P12074 109 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 HOXA5P20719 270 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 IL2RGP31785 369 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 NTF4P34130 210 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 CCL11P51671 97 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 PDLIM3Q53GG5 364 aaPredicted RBP10.93□□□□□ -0.66
RETREG3-201ENST00000309428 VHLLQ6RSH7 139 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 TP53RKQ96S44 253 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 PARD6AQ9NPB6 346 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 PILRBQ9UKJ0 227 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 LOC102724200A0A096LPH7 203 aaPredicted RBP10.93□□□□□ -0.66
RETREG3-201ENST00000309428 IGHV1-45A0A0A0MS14 117 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 ZIC3O60481 467 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 TFF1P04155 84 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 ERVFRD-1P60508 538 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 SRPXP78539 464 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 BSXQ3C1V8 233 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 ZDHHC11Q9H8X9 412 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 DEPPQ9NTK1 212 aa10.93□□□□□ -0.66
RETREG3-201ENST00000309428 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
RETREG3-201ENST00000309428 MAP1AP78559 2803 aaPredicted RBP10.93□□□□□ -0.66
RETREG3-201ENST00000309428 CBR3O75828 277 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 SYNGR4O95473 234 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 CD33P20138 364 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 THBS4P35443 961 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 TMEM241Q24JQ0 296 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 PTX4Q96A99 478 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 MYOZ1Q9NP98 299 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-201ENST00000309428 MDFIC2A0A1B0GVS7 189 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 IGSF23A1L1A6 192 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 DUSP3P51452 185 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-201ENST00000309428 DSCR4P56555 118 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-201ENST00000309428 HIKESHIQ53FT3 197 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 ETFRF1Q6IPR1 90 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 OR1F12Q8NHA8 337 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 MRGPRFQ96AM1 343 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 MISP3Q96FF7 219 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 SPTBN4Q9H254 2564 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 KLF7O75840 302 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-201ENST00000309428 CER1O95813 267 aa10.92□□□□□ -0.66
RETREG3-201ENST00000309428 SCTP09683 121 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms