RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 TUSC2O75896 110 aa18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 MDH2P40926 338 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 CA7P43166 264 aa18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 MZT1Q08AG7 82 aa18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 ADAM5Q6NVV9 412 aa18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 MEX3BQ6ZN04 569 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 LGI3Q8N145 548 aa18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 ZNF565Q8N9K5 539 aa18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 CACNA1AO00555 2505 aa18.87■□□□□ 0.61
PDLIM2-202ENST00000308354 C3orf85A0A1B0GTC6 90 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 CCL21O00585 134 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 SHOXO15266 292 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 DEDDO75618 318 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 TPT1P13693 172 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 SELENOVP59797 346 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 AESQ08117 197 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 GAPTQ8N292 157 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 SLC5A7Q9GZV3 580 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 TREM2Q9NZC2 230 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 OR1A1Q9P1Q5 309 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 GLS2Q9UI32 602 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 MEX3AA1L020 520 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 H7C1Q1 480 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 COL10A1Q03692 680 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 SMIM21Q3B7S5 101 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 TBC1D26Q86UD7 250 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 LDLRAD3Q86YD5 345 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 ST6GALNAC3Q8NDV1 305 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 LRRC20Q8TCA0 184 aa18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 BARX1Q9HBU1 254 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-202ENST00000308354 IGHV3OR15-7A0A075B7D8 119 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 FAM90A27PA6NNH2 459 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 CTXN2P0C2S0 81 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 HKR1P10072 659 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 BAP18Q8IXM2 172 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 FAM185AQ8N0U4 392 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 GCSAMQ8N6F7 178 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 TPRX1Q8N7U7 411 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 SLC35G3Q8N808 338 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 NUP37Q8NFH4 326 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 OR4A4PQ8NGN8 299 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 MBPP02686 304 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 LMO1P25800 156 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 SMCO1Q147U7 214 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 SHEQ5VZ18 495 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 CD177Q8N6Q3 437 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 OR10J5Q8NHC4 309 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 LINC00052Q96N35 136 aa18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 FBXO9Q9UK97 447 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-202ENST00000308354 CACNA1DQ01668 2161 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 GPR31O00270 319 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 HSD17B6O14756 317 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 FGF2P09038 288 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 FAM201AQ5SY85 155 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 TMEM268Q5VZI3 342 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 GALNT11Q8NCW6 608 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 OR52M1Q8NGK5 317 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 TMEM222Q9H0R3 208 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 OR2S2Q9NQN1 319 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 ZC4H2Q9NQZ6 224 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 CCL28Q9NRJ3 127 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 SESN1Q9Y6P5 492 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 NKX2-6A6NCS4 301 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 A8MXK9 166 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 LGALS8O00214 317 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 IGHV1-46P01743 117 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 ZCCHC24Q8N2G6 241 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 BVESQ8NE79 360 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 PRORYQ9H606 182 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 TAF9BQ9HBM6 251 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 PCDHB10Q9UN67 800 aa18.84■□□□□ 0.61
PDLIM2-202ENST00000308354 SRRM5B3KS81 715 aa18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 K7EPK0 472 aa18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 SCO1O75880 301 aa18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 OR4A8P0C604 315 aa18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 RPL12P30050 165 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 HSD17B13Q7Z5P4 300 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 FAM71E2Q8N5Q1 922 aa18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 TMED6Q8WW62 240 aa18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 NARFLQ9H6Q4 476 aa18.83■□□□□ 0.6
PDLIM2-202ENST00000308354 PSG2P11465 335 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 GRNP28799 593 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 OR3A1P47881 315 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 RND3P61587 244 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 TNFAIP6P98066 277 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 ADIPOQQ15848 244 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 COQ2Q96H96 371 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 ERRFI1Q9UJM3 462 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 UBE2J1Q9Y385 318 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 WIPI2Q9Y4P8 454 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 A0A1B0GW55 424 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 TNFSF12O43508 249 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 DUX4L2P0CJ85 424 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 DUX4L3P0CJ86 424 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 DUX4L4P0CJ87 422 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 DUX4L5P0CJ88 424 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 DUX4L6P0CJ89 424 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 DUX4L7P0CJ90 424 aa18.82■□□□□ 0.6
PDLIM2-202ENST00000308354 ZP3P21754 424 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms