RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 DMRTC2Q8IXT2 367 aaPredicted RBP9.96□□□□□ -0.82
TRIM40-205ENST00000307859 LRTM2Q8N967 370 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 OR11L1Q8NGX0 322 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 OR10J5Q8NHC4 309 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 LILRB4Q8NHJ6 448 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 Q8TCH9 128 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 PPP1R1CQ8WVI7 109 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 ERGIC1Q969X5 290 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 FAM210AQ96ND0 272 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 DIRC2Q96SL1 478 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 SUCNR1Q9BXA5 334 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 ESRP2Q9H6T0 727 aaKnown RBP9.96□□□□□ -0.82
TRIM40-205ENST00000307859 COQ3Q9NZJ6 369 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 METRNQ9UJH8 293 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 KCNIP3Q9Y2W7 256 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 OR2W1Q9Y3N9 320 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 TRAV39A0A0B4J263 110 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 C5orf51A6NDU8 294 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 FAM90A27PA6NNH2 459 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 L7N2F9 121 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 GPR31O00270 319 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 ARPC5O15511 151 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 ZNF737O75373 536 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 OR5AC1P0C628 307 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 SSTR2P30874 369 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 PRDX2P32119 198 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 C11orf87Q6NUJ2 197 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 ZNF565Q8N9K5 539 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 LILRB1Q8NHL6 650 aaPredicted RBP9.95□□□□□ -0.82
TRIM40-205ENST00000307859 FAM222BQ8WU58 562 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 SECTM1Q8WVN6 248 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 C2orf50Q96LR7 162 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 SLC5A7Q9GZV3 580 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 SHARPINQ9H0F6 387 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 TAF9BQ9HBM6 251 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 GCM1Q9NP62 436 aa9.95□□□□□ -0.82
TRIM40-205ENST00000307859 OTOGQ6ZRI0 2925 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 C13orf42A0A1B0GVH6 325 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 OOEPA6NGQ2 149 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 C17orf100A8MU93 164 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 MPTX1A8MV57 137 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 M0R233 179 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 MPPED1O15442 326 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 ATP6V1G1O75348 118 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 MPC2O95563 127 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 TFF1P04155 84 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 AESQ08117 197 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 IL15RAQ13261 267 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 OPCMLQ14982 345 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 LIAT1Q6ZQX7 453 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 ZNF767PQ75MW2 155 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 MSI2Q96DH6 328 aaKnown RBP9.94□□□□□ -0.82
TRIM40-205ENST00000307859 PLPPR2Q96GM1 343 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 VRK1Q99986 396 aaPredicted RBP9.94□□□□□ -0.82
TRIM40-205ENST00000307859 METTL8Q9H825 291 aaKnown RBP9.94□□□□□ -0.82
TRIM40-205ENST00000307859 RDH8Q9NYR8 311 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 OR1A1Q9P1Q5 309 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 RNF7Q9UBF6 113 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 DNAJB11Q9UBS4 358 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 KIF25Q9UIL4 384 aa9.94□□□□□ -0.82
TRIM40-205ENST00000307859 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.93□□□□□ -0.82
TRIM40-205ENST00000307859 NKX2-6A6NCS4 301 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 VSTM5A8MXK1 200 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TSC22D2O75157 780 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 HEXAP06865 529 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 HOXB5P09067 269 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 S100A11P31949 105 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TESK1Q15569 626 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 KRBOX4Q5JUW0 171 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 ZNF818PQ6ZRF7 136 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 GLYATL2Q8WU03 294 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 IL1F10Q8WWZ1 152 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 C18orf12Q96KH6 178 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 SNX22Q96L94 193 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TOLLIPQ9H0E2 274 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 KCNIP1Q9NZI2 227 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 NDRG3Q9UGV2 375 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 ITGB1BP2Q9UKP3 347 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TNFSF18Q9UNG2 199 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 ROS1P08922 2347 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 HIVEP3Q5T1R4 2406 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 ABCA2Q9BZC7 2435 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 IGHV3OR15-7A0A075B7D8 119 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 C3orf85A0A1B0GTC6 90 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 C12orf77C9JDV5 145 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 E7EQL1 145 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 CD3EP07766 207 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 WNT2P09544 360 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 PSMB6P28072 239 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 SRPXP78539 464 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 ZNF345Q14585 488 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 SP6Q3SY56 376 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 LRRC37A5PQ49AS3 106 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 C6orf183Q5T699 404 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TRAT1Q6PIZ9 186 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TEX261Q6UWH6 196 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TMUB2Q71RG4 321 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TBC1D26Q86UD7 250 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms