RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ODAMA1E959 279 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 NKX6-3A6NJ46 265 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 C12orf77C9JDV5 145 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 RP2O75695 350 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 GYPAP02724 150 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ZNF728P0DKX0 622 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 CGB3P0DN86 165 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 CGB7P0DN87 165 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 AADACP22760 399 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 NFYAP23511 347 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 SSTR2P30874 369 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 HERV-K104P61576 105 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 DHRS2Q13268 280 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 C4orf46Q504U0 113 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 SLC38A6Q8IZM9 456 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ADAD2Q8NCV1 583 aaKnown RBP10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 OR10J5Q8NHC4 309 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 CORO2AQ92828 525 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 TMEM230Q96A57 120 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 DACT3Q96B18 629 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 CCL13Q99616 98 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 RSRP1Q9BUV0 290 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 TMPRSS13Q9BYE2 586 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 FXYD6Q9H0Q3 95 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 OR6C3Q9NZP0 311 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 C14orf166Q9Y224 244 aaKnown RBP10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ABCA12Q86UK0 2595 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 A0A0B4J2A0 478 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 C9orf170A2RU37 121 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 BET1O15155 118 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 SSNA1O43805 119 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ZNF205O95201 554 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 DUS4LO95620 317 aaKnown RBP10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 HNRNPCP07910 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 PGAM2P15259 253 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 COL8A2P25067 703 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 CD300CQ08708 224 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 PPP1R1AQ13522 171 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 C5orf24Q7Z6I8 188 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 TCTE3Q8IZS6 198 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 C12orf45Q8N5I9 185 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ZNF565Q8N9K5 539 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 OR11H7Q8NGC8 314 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 MITD1Q8WV92 249 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 MARVELD3Q96A59 401 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 GALMQ96C23 342 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 KIRREL1Q96J84 757 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 LINC00574Q9H8X3 128 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ING3Q9NXR8 418 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ZNF69Q9UC07 566 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 SHPKQ9UHJ6 478 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 OR2W1Q9Y3N9 320 aa10.66□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 TRAV39A0A0B4J263 110 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 FAM172BPA6NC97 362 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 C15orf65H3BRN8 121 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 RPS2P15880 293 aaKnown RBP10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 HLA-GP17693 338 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 CDKN1AP38936 164 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 KRTAP10-9P60411 292 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 RND3P61587 244 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 HTD2P86397 168 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 ZNF787Q6DD87 383 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 FAM185AQ8N0U4 392 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 OR52B4Q8NGK2 314 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 FAM216AQ8WUB2 273 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 RAB9BQ9NP90 201 aa10.65□□□□□ -0.7
SHANK2-AS3-201ENST00000307548 AKAP6Q13023 2319 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 NDUFS7O75251 213 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 SFT2D2O95562 160 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 HLA-AP01891 365 aaKnown RBP10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 HBZP02008 142 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 AKR1C4P17516 323 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 SUPT4H1P63272 117 aaKnown RBP10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 MEF2CQ06413 473 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 BAMBIQ13145 260 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 C11orf88Q6PI97 169 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 OR2AK2Q8NG84 335 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 MRGPRDQ8TDS7 321 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 NRGNQ92686 78 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 TMEM246Q9BRR3 403 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 TEX15Q9BXT5 2789 aa10.64□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 TACC2O95359 2948 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 CRYM-AS1A6NIL9 109 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 SPINT2O43291 252 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 OR2A4O95047 310 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 IGHV2-70P01814 119 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 CXCL3P19876 107 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 GNRHRP30968 328 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 IL2RGP31785 369 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 LDLRAD3Q86YD5 345 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 FAM216BQ8N7L0 139 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 OR1L1Q8NH94 360 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 ASB13Q8WXK3 278 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 TOMM40LQ969M1 308 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 GALNT14Q96FL9 552 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 OR2A7Q96R45 310 aa10.63□□□□□ -0.71
SHANK2-AS3-201ENST00000307548 PHB2Q99623 299 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms