RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 RTBDNQ9BSG5 229 aaPredicted RBP9.45□□□□□ -0.9
LSM3-201ENST00000306024 PCGF1Q9BSM1 259 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 SRD5A3Q9H8P0 318 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 TNRC6BQ9UPQ9 1833 aaKnown RBP9.45□□□□□ -0.9
LSM3-201ENST00000306024 H3BP45 60 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 SUPT4H1P63272 117 aaKnown RBP9.45□□□□□ -0.9
LSM3-201ENST00000306024 FOXK1P85037 733 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 UNC119Q13432 240 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 P2RY6Q15077 328 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 TEX38Q6PEX7 206 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 DTX1Q86Y01 620 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 KLHDC3Q9BQ90 382 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 WNT5BQ9H1J7 359 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
LSM3-201ENST00000306024 TMEM11P17152 192 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 FSTP19883 344 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 MAGEA5P43359 124 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 OR3A4PP47883 348 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 HSF1Q00613 529 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 BSXQ3C1V8 233 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 ANKRD39Q53RE8 183 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 FNDC7Q5VTL7 733 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 C16orf82Q7Z2V1 217 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 VN1R17PQ8TDU5 208 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 DIRC2Q96SL1 478 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 PLK3Q9H4B4 646 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 LOC102724200A0A096LPH7 203 aaPredicted RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 LDLRAD4O15165 306 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 CRYABP02511 175 aaKnown RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 HNRNPA3P51991 378 aaKnown RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 ELLP55199 621 aaPredicted RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 TMEM241Q24JQ0 296 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 FAM57BQ71RH2 274 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 CPEB3Q8NE35 698 aaKnown RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 OR2T10Q8NGZ9 312 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 ACY3Q96HD9 319 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 RBM24Q9BX46 236 aaKnown RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 OR2J1Q9GZK6 312 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 CTDSP1Q9GZU7 261 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 ZNF71Q9NQZ8 489 aaPredicted RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 RYDENQ9NUL5 291 aaKnown RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 SLC39A9Q9NUM3 307 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 RBM7Q9Y580 266 aaKnown RBP9.44□□□□□ -0.9
LSM3-201ENST00000306024 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 RTTNQ86VV8 2226 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 PTPRQQ9UMZ3 2332 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 CDC14BO60729 498 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 CLDN15P56746 228 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 KRTDAPP60985 99 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 RAC1P63000 192 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 RTP5Q14D33 572 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 ADPRHL1Q8NDY3 354 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 MRGPRFQ96AM1 343 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 PLEKHF2Q9H8W4 249 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 MSL2Q9HCI7 577 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 Q9N2K0 584 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 PRSS50Q9UI38 385 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 RFNGQ9Y644 331 aa9.44□□□□□ -0.9
LSM3-201ENST00000306024 A0A0G2JMM0 328 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 A0A1W2PPB8 328 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 A0A1W2PRS3 328 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 KIR3DP1A8MWS1 328 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 IGHG1P01857 330 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 LYL1P12980 280 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 S100GP29377 79 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 WNT5AP41221 380 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 ZNF573Q86YE8 665 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 FAM103A1Q9BTL3 118 aaKnown RBP9.43□□□□□ -0.9
LSM3-201ENST00000306024 SPRY4Q9C004 299 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 LPAR5Q9H1C0 372 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 ZNF552Q9H707 407 aaPredicted RBP9.43□□□□□ -0.9
LSM3-201ENST00000306024 K7N7A8 449 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 IL11P20809 199 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 CNN1P51911 297 aaKnown RBP9.43□□□□□ -0.9
LSM3-201ENST00000306024 SOX8P57073 446 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 FAM166AQ6J272 317 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 RTN4RL2Q86UN3 420 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
LSM3-201ENST00000306024 ZNF665Q9H7R5 613 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 LPAR2Q9HBW0 351 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 DNAH14Q0VDD8 3507 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 IGKV1D-42A0A075B6H8 117 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 TRGV5A0A0B4J1U4 118 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 CTSDP07339 412 aaPredicted RBP9.43□□□□□ -0.9
LSM3-201ENST00000306024 TPPP2P59282 170 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 BPIFB3P59826 476 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 SUMO1P63165 101 aaKnown RBP9.43□□□□□ -0.9
LSM3-201ENST00000306024 ICAM4Q14773 271 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 MAJINQ3KP22 176 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 CMTM2Q8TAZ6 248 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 LHX4Q969G2 390 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 PBOV1Q9GZY1 135 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 NAA60Q9H7X0 242 aa9.43□□□□□ -0.9
LSM3-201ENST00000306024 MAP1LC3B2A6NCE7 125 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 FCGR2AP12318 317 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 DYNLT3P51808 116 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 PMP22Q01453 160 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 AAED1Q7RTV5 226 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms