RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 GDNFP39905 211 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 UBE2E1P51965 193 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 PITPNAQ00169 270 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 PNKDQ8N490 385 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 OR10A7Q8NGE5 316 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 AUNIPQ9H7T9 357 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 Q9N2K0 584 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 ADAM30Q9UKF2 790 aa20■□□□□ 0.79
HOXC9-201ENST00000303450 HBZP02008 142 aa19.99■□□□□ 0.79
HOXC9-201ENST00000303450 TAS2R20P59543 309 aa19.99■□□□□ 0.79
HOXC9-201ENST00000303450 HCP5Q6MZN7 132 aa19.99■□□□□ 0.79
HOXC9-201ENST00000303450 BRD3OSQ6XYD6 125 aa19.99■□□□□ 0.79
HOXC9-201ENST00000303450 Q6ZPA2 131 aa19.99■□□□□ 0.79
HOXC9-201ENST00000303450 NUDCD2Q8WVJ2 157 aa19.99■□□□□ 0.79
HOXC9-201ENST00000303450 MS4A7Q9GZW8 240 aaPredicted RBP19.99■□□□□ 0.79
HOXC9-201ENST00000303450 A0A1W2PRD5 423 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 A0A1W2PRF3 423 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 A0A1W2PRM7 423 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 A6NHS1 94 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 FCGR3AP08637 254 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 FPR2P25090 351 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 BPIFB3P59826 476 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 SCGB2A2Q13296 93 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 RUSC1-AS1Q66K80 236 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 BAIAP2L2Q6UXY1 529 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 LAX1Q8IWV1 398 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 OR1L1Q8NH94 360 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 NXF2Q9GZY0 626 aaKnown RBP19.98■□□□□ 0.79
HOXC9-201ENST00000303450 MIXL1Q9H2W2 232 aa19.98■□□□□ 0.79
HOXC9-201ENST00000303450 MRPS7Q9Y2R9 242 aaKnown RBP19.98■□□□□ 0.79
HOXC9-201ENST00000303450 FAM172BPA6NC97 362 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 MELTFP08582 738 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 EPHA1P21709 976 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 HMGN3Q15651 99 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 BATF3Q9NR55 127 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 EXTL2Q9UBQ6 330 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 ZNF69Q9UC07 566 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 ZNF230Q9UIE0 474 aaPredicted RBP19.97■□□□□ 0.79
HOXC9-201ENST00000303450 IGHV2-26A0A0B4J1V2 119 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 F2RL2O00254 374 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 SDCBPO00560 298 aaPredicted RBP19.97■□□□□ 0.79
HOXC9-201ENST00000303450 DTYMKP23919 212 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 ABHD12Q8N2K0 398 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 C22orf15Q8WYQ4 148 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 GALMQ96C23 342 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 CLEC7AQ9BXN2 247 aa19.97■□□□□ 0.79
HOXC9-201ENST00000303450 NPFFO15130 113 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 FAM157CP0CG43 387 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 PTHLHP12272 177 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 HLA-DRB3P79483 266 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 TMEM30BQ3MIR4 351 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 C5orf24Q7Z6I8 188 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 OR11H6Q8NGC7 330 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 OR52M1Q8NGK5 317 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 MMP27Q9H306 513 aa19.96■□□□□ 0.79
HOXC9-201ENST00000303450 A0A087X0M5 115 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 A0A1B0GX30 115 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 TRDCB7Z8K6 153 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 MADCAM1Q13477 382 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 IL1F10Q8WWZ1 152 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 MAFIPQ8WZ33 124 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 ST6GALNAC5Q9BVH7 336 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 ZNF286AQ9HBT8 521 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 GFOD1Q9NXC2 390 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 GNG12Q9UBI6 72 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 A3GALT2U3KPV4 340 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 MXRA5Q9NR99 2828 aa19.95■□□□□ 0.78
HOXC9-201ENST00000303450 IGHV3-43A0A0B4J1X8 118 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 SSX5O60225 188 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 HLA-DQB1P01920 261 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 ARG1P05089 322 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 IGHV3-43DP0DP04 118 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 CD34P28906 385 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 KIR2DS4P43632 304 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 LGALS4P56470 323 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 LOXL3P58215 753 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 KIR2DS1Q14954 304 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 CNIH2Q6PI25 160 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 PIP4P2Q8N4L2 257 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 DIRAS2Q96HU8 199 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 OR2S2Q9NQN1 319 aa19.94■□□□□ 0.78
HOXC9-201ENST00000303450 MEIOCA2RUB1 952 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 TOR1AO14656 332 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 IGHV3-7P01780 117 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 SCTP09683 121 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 PRSS3P35030 304 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 HTD2P86397 168 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 SRSF7Q16629 238 aaKnown RBP eCLIP19.93■□□□□ 0.78
HOXC9-201ENST00000303450 MIDNQ504T8 468 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 UTF1Q5T230 341 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 ZNF626Q68DY1 528 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 C9orf139Q6ZV77 190 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 SNX29P2Q8IUI4 249 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 BCL6BQ8N143 479 aaPredicted RBP19.93■□□□□ 0.78
HOXC9-201ENST00000303450 LEAP2Q969E1 77 aa19.93■□□□□ 0.78
HOXC9-201ENST00000303450 NIPBLQ6KC79 2804 aaeCLIP19.93■□□□□ 0.78
HOXC9-201ENST00000303450 SAA4P35542 130 aa19.92■□□□□ 0.78
HOXC9-201ENST00000303450 PRRX1P54821 245 aa19.92■□□□□ 0.78
HOXC9-201ENST00000303450 OR9G1Q8NH87 305 aa19.92■□□□□ 0.78
HOXC9-201ENST00000303450 ZNF596Q8TC21 504 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms