RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 PF4V1P10720 104 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 BCL3P20749 454 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 GALR1P47211 349 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PIGPP57054 158 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 SEC11AP67812 179 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 RUNX3Q13761 415 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 BEX5Q5H9J7 111 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 SIRT6Q8N6T7 355 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 C5orf17Q8NAS9 161 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OR10AG1Q8NH19 301 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 HSD17B8Q92506 261 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TSACCQ96A04 125 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 MISP3Q96FF7 219 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ALKBH7Q9BT30 221 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 DNAJB12Q9NXW2 375 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 GPR132Q9UNW8 380 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 STARD10Q9Y365 291 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 A0A0G2JMZ2 1700 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 LRRC37A2A6NM11 1700 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF320A2RRD8 509 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 M0R1B8 84 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PRSS56P0CW18 603 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ACAA2P42765 397 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 RACK1P63244 317 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PHLDA2Q53GA4 152 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 Q6ZS49 121 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 FAM169BQ8N8A8 192 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OR10G8Q8NGN5 311 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 OR10D4PQ8NGN7 298 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TRMT61AQ96FX7 289 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PPP1R3CQ9UQK1 317 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 SP1P08047 785 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 IFITM3Q01628 133 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 RPL18Q07020 188 aaKnown RBP4.64□□□□□ -1.67
SCN1A-201ENST00000303395 ACKR1Q16570 336 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 CT83Q5H943 113 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 KLHDC9Q8NEP7 349 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TPSD1Q9BZJ3 242 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PRNDQ9UKY0 176 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 PROCRQ9UNN8 238 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 THSD7AQ9UPZ6 1657 aa4.64□□□□□ -1.67
SCN1A-201ENST00000303395 TRBV23-1A0A0A0MS06 115 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 OR4C46A6NHA9 309 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 FGF18O76093 207 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 TTRP02766 147 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 LYL1P12980 280 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 AGAP20933 346 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 CD70P32970 193 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM33P57088 247 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 SLC35B1P78383 322 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 DCDP81605 110 aaKnown RBP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 PLPPR1Q8TBJ4 325 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 HARBI1Q96MB7 349 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 SLX1AQ9BQ83 275 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 CXCL16Q9H2A7 254 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 SMPXQ9UHP9 88 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 OR51B4Q9Y5P0 310 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 SPG11Q96JI7 2443 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 TRAV27A0A087WT01 109 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 TRGV8A0A0C4DH27 118 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ROBO4Q8WZ75 1007 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 DYRK2Q92630 601 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 RAB1CQ92928 201 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 RPEQ96AT9 228 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 AGMATQ9BSE5 352 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ST6GALNAC2Q9UJ37 374 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 F2RL2O00254 374 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 NUPL2O15504 423 aaKnown RBP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 GYPAP02724 150 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 WNT5AP41221 380 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 CXCL12P48061 93 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 MVDP53602 400 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 SPANXN5Q5MJ07 72 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 COX20Q5RI15 118 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 MED25Q71SY5 747 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 FAM90A1Q86YD7 464 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 D2HGDHQ8N465 521 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM222Q9H0R3 208 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ZFP30Q9Y2G7 519 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 LOC107984156A0A0G2JMH3 177 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 FNDC10F2Z333 226 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 KBTBD11O94819 623 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 OR4Q2P0C623 313 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 OR13C7P0DN81 318 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 CLDN18P56856 261 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 RIGQ13278 110 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 TMEM249Q2WGJ8 235 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ARL17AQ8IVW1 177 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-201ENST00000303395 SLC16A11Q8NCK7 471 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 COX14Q96I36 57 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 VGLL1Q99990 258 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ZNF253O75346 499 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 CLDN17P56750 224 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 PRSS36Q5K4E3 855 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 OR4C13Q8NGP0 309 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 OR1P1Q8NH06 330 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 KCNS1Q96KK3 526 aa4.63□□□□□ -1.67
SCN1A-201ENST00000303395 ELOVL1Q9BW60 279 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms