RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 JMJD6Q6NYC1 403 aaPredicted RBP12.54□□□□□ -0.4
HIPK3-201ENST00000303296 ERASQ7Z444 233 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 PTOV1Q86YD1 416 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 ARRDC1Q8N5I2 433 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 VGLL1Q99990 258 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
HIPK3-201ENST00000303296 J3QR06 171 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 SRFP11831 508 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 SELENOPP49908 381 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 C15orf39Q6ZRI6 1047 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 HSPB2A8KAH6 182 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 HSPB2Q16082 182 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 ST3GAL2Q16842 350 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 WDR38Q5JTN6 314 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 ANKRD33Q7Z3H0 272 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 OTOSQ8NHW6 89 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 HSPB9Q9BQS6 159 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 ARFGEF2Q9Y6D5 1785 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 GLDNQ6ZMI3 551 aaPredicted RBP12.54□□□□□ -0.4
HIPK3-201ENST00000303296 ATOH7Q8N100 152 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 HSPB7Q9UBY9 170 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 KIF13AQ9H1H9 1805 aa12.54□□□□□ -0.4
HIPK3-201ENST00000303296 PROB1E7EW31 1015 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
HIPK3-201ENST00000303296 RHNO1Q9BSD3 238 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 NTMQ9P121 344 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 ITLN2Q8WWU7 325 aaPredicted RBP12.53□□□□□ -0.4
HIPK3-201ENST00000303296 CKAP5Q14008 2032 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 FER1L5A0AVI2 2057 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 ZAR1LA6NP61 321 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 LHX8Q68G74 356 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 PRRT4C9JH25 899 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 FAM106CPP0CH98 169 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 ZBP1Q9H171 429 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 C2CD4DB7Z1M9 353 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 PCMT1P22061 227 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 RAC3P60763 192 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 INSL4Q14641 139 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
HIPK3-201ENST00000303296 ADRA2AP08913 450 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 PKIAP61925 76 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 SLC25A19Q9HC21 320 aa12.53□□□□□ -0.4
HIPK3-201ENST00000303296 CACNA1DQ01668 2161 aa12.52□□□□□ -0.4
HIPK3-201ENST00000303296 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.4
HIPK3-201ENST00000303296 OR2A4O95047 310 aa12.52□□□□□ -0.4
HIPK3-201ENST00000303296 STARD6P59095 220 aa12.52□□□□□ -0.4
HIPK3-201ENST00000303296 SSPNQ14714 243 aa12.52□□□□□ -0.4
HIPK3-201ENST00000303296 ACER2Q5QJU3 275 aa12.52□□□□□ -0.4
HIPK3-201ENST00000303296 OR2A7Q96R45 310 aa12.52□□□□□ -0.4
HIPK3-201ENST00000303296 IGHV3-66A0A0C4DH42 116 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 GDF9O60383 454 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 MPLP40238 635 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 SELENOTP62341 195 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 CFAP161Q6P656 301 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 TINAGQ9UJW2 476 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 PARP4Q9UKK3 1724 aaKnown RBP12.52□□□□□ -0.41
HIPK3-201ENST00000303296 hCG_38984A0A1B0GV85 526 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 PDCD6O75340 191 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 IGHV4-39P01824 125 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 FAM89BQ8N5H3 189 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 OR5A1Q8NGJ0 315 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 ZFC3H1O60293 1989 aaKnown RBP12.52□□□□□ -0.41
HIPK3-201ENST00000303296 PPLO60437 1756 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 A0A1B0GTH9 108 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 RBMY1BA6NDE4 496 aaKnown RBP12.52□□□□□ -0.41
HIPK3-201ENST00000303296 RBMY1EA6NEQ0 496 aaKnown RBP12.52□□□□□ -0.41
HIPK3-201ENST00000303296 LINC01565O15544 149 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 MPC2O95563 127 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 RBMY1DP0C7P1 496 aaKnown RBP12.52□□□□□ -0.41
HIPK3-201ENST00000303296 RBMY1A1P0DJD3 496 aaKnown RBP12.52□□□□□ -0.41
HIPK3-201ENST00000303296 RBMY1CP0DJD4 496 aa12.52□□□□□ -0.41
HIPK3-201ENST00000303296 MAP1BP46821 2468 aaKnown RBP12.52□□□□□ -0.41
HIPK3-201ENST00000303296 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 TMEM127O75204 238 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 ISL1P61371 349 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 RNF7Q9UBF6 113 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 SSBP1Q04837 148 aaKnown RBP12.51□□□□□ -0.41
HIPK3-201ENST00000303296 GAPTQ8N292 157 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 LINC01387J3KSC0 135 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 HYPMO75409 117 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 ADAP1O75689 374 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 TYMSP04818 313 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 CCDC144NLQ6NUI1 221 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 APOBEC4Q8WW27 367 aaKnown RBP12.51□□□□□ -0.41
HIPK3-201ENST00000303296 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 METTL1Q9UBP6 276 aaKnown RBP12.51□□□□□ -0.41
HIPK3-201ENST00000303296 PRNDQ9UKY0 176 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 TRAV1-2A0A0B4J238 106 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 DLEU7Q6UYE1 221 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 PRSS42Q7Z5A4 293 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 AMER3Q8N944 861 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 GPR6P46095 362 aaPredicted RBP12.51□□□□□ -0.41
HIPK3-201ENST00000303296 UBE2DNLQ8IWF7 75 aa12.51□□□□□ -0.41
HIPK3-201ENST00000303296 KLKB1P03952 638 aa12.5□□□□□ -0.41
HIPK3-201ENST00000303296 REG1AP05451 166 aa12.5□□□□□ -0.41
HIPK3-201ENST00000303296 SYS1Q8N2H4 156 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms