RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TNFSF15O95150 251 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 NPY1RP25929 384 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 DDTP30046 118 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 MRGPRDQ8TDS7 321 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 HES7Q9BYE0 225 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 PAM16Q9Y3D7 125 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 GNG10P50151 68 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 ATOH1Q92858 354 aaPredicted RBP6.71□□□□□ -1.34
SF3B3-201ENST00000302516 WDR54Q9H977 334 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 DNAJC13O75165 2243 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 PQLC2LA1A4F0 135 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 A8MWL6 223 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 DEFB108AA8MXU0 73 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SNURFLB1AK76 121 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 MPLP40238 635 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 FZD5Q13467 585 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF260Q3ZCT1 412 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SPATA45Q537H7 98 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM240Q5SV17 173 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 AMMECR1LQ6DCA0 310 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF788Q6ZQV5 615 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 OR2D3Q8NGH3 330 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 OR1L8Q8NGR8 309 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ISOC2Q96AB3 205 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 C19orf24Q9BVV8 132 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM222Q9H0R3 208 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ZMIZ1Q9ULJ6 1067 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 NKX2-6A6NCS4 301 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TTRP02766 147 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ISG15P05161 165 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TGIF2LXQ8IUE1 241 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ADAD2Q8NCV1 583 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 OR4P4Q8NGL7 312 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 MEGF10Q96KG7 1140 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 CHRNA10Q9GZZ6 450 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 RCC2Q9P258 522 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF256Q9Y2P7 627 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ORM2P19652 201 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ID1P41134 155 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SLC23A3Q6PIS1 610 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 BHLHA15Q7RTS1 189 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 OR1P1Q8NH06 330 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 VN1R17PQ8TDU5 208 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 CDX2Q99626 313 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 CCL27Q9Y4X3 112 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 IFITM10A6NMD0 228 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 J3QT63 122 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 BGLAPP02818 100 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SUCLG1P53597 346 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 RPS20P60866 119 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 RHBDD2Q6NTF9 364 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 RBM14Q96PK6 669 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 CA2P00918 260 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 FAM157CP0CG43 387 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 GABRG2P18507 467 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 MRPS11P82912 194 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF273Q14593 569 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM196Q5HYL7 178 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 OR8A1Q8NGG7 326 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 GHITMQ9H3K2 345 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 OR5AC2Q9NZP5 309 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 KLK13Q9UKR3 277 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 HIGD1AQ9Y241 93 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 RTTNQ86VV8 2226 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 DNASE2O00115 360 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SYNGR1O43759 233 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SPINK4O60575 86 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 RBM11P57052 281 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TUBD1Q9UJT1 453 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 METAP1P53582 386 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 DLX1P56177 255 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM30BQ3MIR4 351 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TSPO2Q5TGU0 170 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 HPRT1P00492 218 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 CISD3P0C7P0 127 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 MUC1P15941 1255 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 KIR3DL2P43630 455 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 COMPP49747 757 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 GZMMP51124 257 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 BHLHA9Q7RTU4 235 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 VN1R4Q7Z5H5 301 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SPNS2Q8IVW8 549 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF519Q8TB69 540 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 ZDHHC16Q969W1 377 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TRMT61AQ96FX7 289 aaKnown RBP6.7□□□□□ -1.34
SF3B3-201ENST00000302516 TBX15Q96SF7 602 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 CACNA1IQ9P0X4 2223 aa6.7□□□□□ -1.34
SF3B3-201ENST00000302516 SELENOTP62341 195 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 GFRALQ6UXV0 394 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM45BQ96B21 275 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 SARGQ9BW04 601 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ELOVL1Q9BW60 279 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 P4HTMQ9NXG6 502 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 NMBP08949 121 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 FAM209BQ5JX69 171 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 CCDC144NLQ6NUI1 221 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 CXorf67Q86X51 503 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-201ENST00000302516 AQP3Q92482 292 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms