RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MBD2Q9UBB5 411 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 KIAA2026Q5HYC2 2103 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 OOEPA6NGQ2 149 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 H0YIZ8 118 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 CFDP00746 253 aaPredicted RBP18.64■□□□□ 0.57
SMAD1-201ENST00000302085 CD55P08174 381 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 PAX5Q02548 391 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 TGIF2LYQ8IUE0 185 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 ZCCHC24Q8N2G6 241 aaKnown RBP18.64■□□□□ 0.57
SMAD1-201ENST00000302085 OR10V1Q8NGI7 309 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 LHFPL5Q8TAF8 219 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 ERGIC1Q969X5 290 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 SNX22Q96L94 193 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 ARL6Q9H0F7 186 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 PARP12Q9H0J9 701 aaKnown RBP18.64■□□□□ 0.57
SMAD1-201ENST00000302085 GSKIPQ9P0R6 139 aa18.64■□□□□ 0.57
SMAD1-201ENST00000302085 TMEM8BA6NDV4 472 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 VSTM5A8MXK1 200 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 HSPA12AO43301 675 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 CYB5R3P00387 301 aaPredicted RBP18.63■□□□□ 0.57
SMAD1-201ENST00000302085 IFNA21P01568 189 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 CEACAM6P40199 344 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 AP2S1P53680 142 aaPredicted RBP18.63■□□□□ 0.57
SMAD1-201ENST00000302085 CCL8P80075 99 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 IAH1Q2TAA2 248 aaPredicted RBP18.63■□□□□ 0.57
SMAD1-201ENST00000302085 LYZL2Q7Z4W2 148 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 LGI3Q8N145 548 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 LILRB1Q8NHL6 650 aaPredicted RBP18.63■□□□□ 0.57
SMAD1-201ENST00000302085 ANGPTL6Q8NI99 470 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 MRGPRDQ8TDS7 321 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 DIRC2Q96SL1 478 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 NDRG3Q9UGV2 375 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 CACNA1DQ01668 2161 aa18.63■□□□□ 0.57
SMAD1-201ENST00000302085 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.62■□□□□ 0.57
SMAD1-201ENST00000302085 PGLYRP1O75594 196 aaPredicted RBP18.62■□□□□ 0.57
SMAD1-201ENST00000302085 BVESQ8NE79 360 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 OR13A1Q8NGR1 328 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 TMEM222Q9H0R3 208 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 HBZP02008 142 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 LUMP51884 338 aaPredicted RBP18.62■□□□□ 0.57
SMAD1-201ENST00000302085 FAM219AQ8IW50 185 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 GALMQ96C23 342 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 DCTN5Q9BTE1 182 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 PPP1R3CQ9UQK1 317 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 MAB21L2Q9Y586 359 aa18.62■□□□□ 0.57
SMAD1-201ENST00000302085 IGLV2-14P01704 120 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 CD3EP07766 207 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 TLE1Q04724 770 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 RAB32Q13637 225 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 FAM53AQ6NSI3 398 aaPredicted RBP18.61■□□□□ 0.57
SMAD1-201ENST00000302085 CMTM1Q8IZ96 169 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 ZNRF1Q8ND25 227 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 LURAP1Q96LR2 239 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 DCAF16Q9NXF7 216 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 RNF222A6NCQ9 220 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 K7N7A8 449 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 ERVH48-1M5A8F1 160 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 KCNAB3O43448 404 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 TNFSF12O43508 249 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 HTR2BP41595 481 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 EDDM3AQ14507 147 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 C6orf183Q5T699 404 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 KCNRGQ8N5I3 272 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 OR52L2PQ8NGH6 319 aa18.61■□□□□ 0.57
SMAD1-201ENST00000302085 UBE2J1Q9Y385 318 aaPredicted RBP18.61■□□□□ 0.57
SMAD1-201ENST00000302085 ROS1P08922 2347 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 A0A0D9SG52 128 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 MGST3O14880 152 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 PLAUP00749 431 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 LYL1P12980 280 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 IL2RGP31785 369 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 EXOSC2Q13868 293 aaKnown RBP18.6■□□□□ 0.57
SMAD1-201ENST00000302085 MEX3BQ6ZN04 569 aaKnown RBP18.6■□□□□ 0.57
SMAD1-201ENST00000302085 ACOT7LQ6ZUV0 252 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 CA5BP1Q8WTZ4 195 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 TMEM56Q96MV1 263 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 TMEM56-RWDD3S4R434 201 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 COL6A6A6NMZ7 2263 aa18.6■□□□□ 0.57
SMAD1-201ENST00000302085 NBASA2RRP1 2371 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 MEX3AA1L020 520 aaKnown RBP18.59■□□□□ 0.57
SMAD1-201ENST00000302085 OR2F2O95006 317 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 TNFRSF1AP19438 455 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 OR2F1Q13607 317 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 ZNF345Q14585 488 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 MST1LQ2TV78 715 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 DEFB108BQ8NET1 73 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 PPP1R35Q8TAP8 253 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 FAM122AQ96E09 287 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 DNTTIP1Q9H147 329 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 KCNJ16Q9NPI9 418 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 OR5AC2Q9NZP5 309 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 FBXO9Q9UK97 447 aaPredicted RBP18.59■□□□□ 0.57
SMAD1-201ENST00000302085 ITGB1BP2Q9UKP3 347 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 DYSFO75923 2080 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 SIAH2O43255 324 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 OR8U9P0C7N5 309 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 TMEM268Q5VZI3 342 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 STUMQ69YW2 141 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 PRSS54Q6PEW0 395 aa18.59■□□□□ 0.57
SMAD1-201ENST00000302085 SELENOHQ8IZQ5 122 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms