RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SNRPCP09234 159 aaKnown RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 NAAAQ02083 359 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 PRICKLE4Q2TBC4 344 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 TMEM183AQ8IXX5 376 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 ALX4Q9H161 411 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 FFAR1O14842 300 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 METAP1P53582 386 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 PPP1CAP62136 330 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 TEPPQ6URK8 271 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 MIEN1Q9BRT3 115 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 MRPL18Q9H0U6 180 aaKnown RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 CDC42EP3Q9UKI2 254 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 OR2W1Q9Y3N9 320 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 PRRC2BQ5JSZ5 2229 aaKnown RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 H0YL77 283 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 LEPROTL1O95214 131 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 IRF3Q14653 427 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 TIMP4Q99727 224 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 BEX4Q9NWD9 120 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 CLN8Q9UBY8 286 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 A0A1B0GUL6 1792 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 A0A1B0GU03 582 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 A0A1W2PRD5 423 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 A0A1W2PRF3 423 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 A0A1W2PRM7 423 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 IL4P05112 153 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 MESTQ5EB52 335 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 LDLRAD2Q5SZI1 272 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 SLC23A3Q6PIS1 610 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 FAM222BQ8WU58 562 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 SAP30LQ9HAJ7 183 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 ASCL3Q9NQ33 180 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 KLK13Q9UKR3 277 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 MYF5P13349 255 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 KIR2DL1P43626 348 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 KIR2DL2P43627 348 aaPredicted RBP13.04□□□□□ -0.32
SCN3B-201ENST00000299333 SPANXN1Q5VSR9 72 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 CCL17Q92583 94 aa13.04□□□□□ -0.32
SCN3B-201ENST00000299333 IGKV3-7A0A075B6H7 116 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 TRAV39A0A0B4J263 110 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 hADV38S2A0JD32 116 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 ZNF729A6NN14 1252 aaPredicted RBP13.03□□□□□ -0.32
SCN3B-201ENST00000299333 HOXD4P09016 255 aaPredicted RBP13.03□□□□□ -0.32
SCN3B-201ENST00000299333 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
SCN3B-201ENST00000299333 RASL11BQ9BPW5 248 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 R3HDMLQ9H3Y0 253 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 PCOLCE2Q9UKZ9 415 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 WIPI2Q9Y4P8 454 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 COX11Q9Y6N1 276 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 KBTBD11O94819 623 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 APELAP0DMC3 54 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 CBLN3Q6UW01 205 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 ZNF519Q8TB69 540 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 TNFRSF14Q92956 283 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 PARLQ9H300 379 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 MT-ND6P03923 174 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 GUCD1Q96NT3 240 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 OR4D11Q8NGI4 311 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 COA4Q9NYJ1 87 aa13.03□□□□□ -0.32
SCN3B-201ENST00000299333 OR4A8P0C604 315 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 OR2I1PQ8NGU4 316 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 A0A1W2PPC4 97 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 PIGYQ3MUY2 71 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 PLSCR4Q9NRQ2 329 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 SPCS1Q9Y6A9 102 aa13.02□□□□□ -0.32
SCN3B-201ENST00000299333 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 VSIG8P0DPA2 414 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 IBA57Q5T440 356 aaKnown RBP13.02□□□□□ -0.33
SCN3B-201ENST00000299333 SFTPA2Q8IWL1 248 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 SFTPA1Q8IWL2 248 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 ASB10Q8WXI3 467 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 LAMB1P07942 1786 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 GABRG3Q99928 467 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 RARRES2Q99969 163 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 CACNA1SQ13698 1873 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 HSPB1P04792 205 aaKnown RBP13.02□□□□□ -0.33
SCN3B-201ENST00000299333 HERPUD1Q15011 391 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 SLC25A30Q5SVS4 291 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 LINC01465Q8N7H1 131 aa13.02□□□□□ -0.33
SCN3B-201ENST00000299333 CDX2Q99626 313 aaPredicted RBP13.02□□□□□ -0.33
SCN3B-201ENST00000299333 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
SCN3B-201ENST00000299333 OR13C6PQ8NH95 151 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 ASB5Q8WWX0 329 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 MRGPRX1Q96LB2 322 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 TRGV8A0A0C4DH27 118 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 HOXA4Q00056 320 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-201ENST00000299333 RIPPLY2Q5TAB7 128 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 KLF3P57682 345 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-201ENST00000299333 DEFB109BQ30KR1 87 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 PPP1R3EQ9H7J1 279 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 ARID1AO14497 2285 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 IGHV3-21A0A0B4J1V1 117 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 TNFAIP6P98066 277 aaPredicted RBP13.01□□□□□ -0.33
SCN3B-201ENST00000299333 OR10D3Q8NH80 312 aa13.01□□□□□ -0.33
SCN3B-201ENST00000299333 TM4SF19Q96DZ7 209 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms