RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ZNF286AQ9HBT8 521 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 SLC2A8Q9NY64 477 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 SCP2D1Q9UJQ7 156 aa17.37■□□□□ 0.37
SMCO4-201ENST00000298966 TRAV38-1A0A0B4J264 116 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 KIR2DS1A0A191URI9 304 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 UBE2QL1A1L167 161 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 PFDN1O60925 122 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 NDUFB6O95139 128 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 PSG2P11465 335 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 DUSP1P28562 367 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 KIR2DS4P43632 304 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 KIR2DS1Q14954 304 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 SPRNQ5BIV9 151 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 SFRP4Q6FHJ7 346 aaPredicted RBP17.36■□□□□ 0.37
SMCO4-201ENST00000298966 ZNF782Q6ZMW2 699 aaPredicted RBP17.36■□□□□ 0.37
SMCO4-201ENST00000298966 TMEM17Q86X19 198 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 OR4D10Q8NGI6 311 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 OR5H2Q8NGV7 314 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 OR4K15Q8NH41 348 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 CHMP1AQ9HD42 196 aaPredicted RBP17.36■□□□□ 0.37
SMCO4-201ENST00000298966 TMEM106BQ9NUM4 274 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 NUDT15Q9NV35 164 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 ZNF581Q9P0T4 197 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 OR14J1Q9UGF5 321 aa17.36■□□□□ 0.37
SMCO4-201ENST00000298966 OOEPA6NGQ2 149 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 RFPL4AA6NLU0 287 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 RFPL4AL1F8VTS6 287 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 TMEM178BH3BS89 294 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 LGALS8O00214 317 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 SIRPB1O00241 398 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 DHFRP00374 187 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 IFNA6P05013 189 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 H2AFB2P0C5Z0 115 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 HLA-DMAP28067 261 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 PRDX2P32119 198 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 OR3A3P47888 321 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 RBMS2Q15434 407 aaKnown RBP17.35■□□□□ 0.37
SMCO4-201ENST00000298966 GRK1Q15835 563 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 FAAP20Q6NZ36 180 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 BCL6BQ8N143 479 aaPredicted RBP17.35■□□□□ 0.37
SMCO4-201ENST00000298966 ZNF561Q8N587 486 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 OR4S1Q8NGB4 309 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 OR5AP2Q8NGF4 316 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 CCL17Q92583 94 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 PPP1R14BQ96C90 147 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 SNX22Q96L94 193 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 ST6GALNAC5Q9BVH7 336 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 TINAGL1Q9GZM7 467 aaPredicted RBP17.35■□□□□ 0.37
SMCO4-201ENST00000298966 C20orf85Q9H1P6 137 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 ANXA10Q9UJ72 324 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 AUP1Q9Y679 476 aa17.35■□□□□ 0.37
SMCO4-201ENST00000298966 M0QYG6 137 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 NDUFA2O43678 99 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 AMY2AP04746 511 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 ZNF735P0CB33 412 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 MDKP21741 143 aaPredicted RBP17.34■□□□□ 0.37
SMCO4-201ENST00000298966 PDCD1Q15116 288 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 ATPAF1Q5TC12 328 aaPredicted RBP17.34■□□□□ 0.37
SMCO4-201ENST00000298966 SLC35E4Q6ICL7 350 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 OR52W1Q6IF63 320 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 DEFB108BQ8NET1 73 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 OR51S1Q8NGJ8 323 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 OR5D13Q8NGL4 314 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 ANGPTL6Q8NI99 470 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 SDSLQ96GA7 329 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 ZNF48Q96MX3 618 aaPredicted RBP17.34■□□□□ 0.37
SMCO4-201ENST00000298966 SLC25A21Q9BQT8 299 aaPredicted RBP17.34■□□□□ 0.37
SMCO4-201ENST00000298966 FAM234AQ9H0X4 552 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 NCOR1P1Q9H4R4 102 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 TMEM165Q9HC07 324 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 ZNF222Q9UK12 451 aa17.34■□□□□ 0.37
SMCO4-201ENST00000298966 A0A0B4J293 547 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 TMEM30CPA0ZSE6 113 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 NKX6-3A6NJ46 265 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 CLDN34H7C241 214 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 DIRAS3O95661 229 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 CTXN2P0C2S0 81 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 HRH1P35367 487 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 MECP2P51608 486 aaKnown RBP17.33■□□□□ 0.36
SMCO4-201ENST00000298966 ARPC4P59998 168 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 GMFBP60983 142 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 TATDN3Q17R31 274 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 STUMQ69YW2 141 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 ZNF880Q6PDB4 577 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 ZNF497Q6ZNH5 498 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 ZNF554Q86TJ5 538 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 CYYR1Q96J86 154 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 MS4A7Q9GZW8 240 aaPredicted RBP17.33■□□□□ 0.36
SMCO4-201ENST00000298966 Q9N2K0 584 aa17.33■□□□□ 0.36
SMCO4-201ENST00000298966 IGKV1D-17A0A075B6S4 117 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 TRAV6A0A075B6T7 132 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 MGST3O14880 152 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 PRAF2O60831 178 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 PEX14O75381 377 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 CYB5R3P00387 301 aaPredicted RBP17.32■□□□□ 0.36
SMCO4-201ENST00000298966 FCER2P06734 321 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 TRAPPC2P0DI81 140 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 TRAPPC2BP0DI82 140 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 ECI1P42126 302 aa17.32■□□□□ 0.36
SMCO4-201ENST00000298966 COL10A1Q03692 680 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms