RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NPSP0C0P6 89 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 FGF5P12034 268 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 OTX2P32243 289 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 ZFP36L1Q07352 338 aaKnown RBP13.38□□□□□ -0.27
UBAP1-201ENST00000297661 P2RY6Q15077 328 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 TRIP6Q15654 476 aaKnown RBP13.38□□□□□ -0.27
UBAP1-201ENST00000297661 FAM27BQ5VT28 67 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 TEX38Q6PEX7 206 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 LGI3Q8N145 548 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 OR5C1Q8NGR4 320 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 SRD5A3Q9H8P0 318 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 FREM1Q5H8C1 2179 aa13.38□□□□□ -0.27
UBAP1-201ENST00000297661 SYNGR3O43761 229 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 CRYGSP22914 178 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 TLE4Q04727 773 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 ARL6IP1Q15041 203 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 COA6Q5JTJ3 125 aaKnown RBP13.37□□□□□ -0.27
UBAP1-201ENST00000297661 SLC25A26Q70HW3 274 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 OR10G4Q8NGN3 311 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 OR1F12Q8NHA8 337 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 BORCS8Q96FH0 119 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 GPHA2Q96T91 129 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 SLC2A9Q9NRM0 540 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 VAMP5O95183 116 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 HBE1P02100 147 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 CD55P08174 381 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 MMP9P14780 707 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 RAC1P63000 192 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF92Q03936 586 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 ANKRD39Q53RE8 183 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 WIPI1Q5MNZ9 446 aaPredicted RBP13.37□□□□□ -0.27
UBAP1-201ENST00000297661 WDR25Q64LD2 544 aaPredicted RBP13.37□□□□□ -0.27
UBAP1-201ENST00000297661 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 AGBL5Q8NDL9 886 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 WDR54Q9H977 334 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 VAX2Q9UIW0 290 aa13.37□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF732B4DXR9 585 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 LOC400499M0QZD8 3231 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 EPHA1P21709 976 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 CARD18P57730 90 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
UBAP1-201ENST00000297661 PSG4Q00888 419 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 PIGCQ92535 297 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF845Q96IR2 970 aaPredicted RBP13.36□□□□□ -0.27
UBAP1-201ENST00000297661 C11orf1Q9H5F2 150 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 SDF2L1Q9HCN8 221 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 PHF1O43189 567 aaPredicted RBP13.36□□□□□ -0.27
UBAP1-201ENST00000297661 CST7O76096 145 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 NRASP01111 189 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 FKBP2P26885 142 aaKnown RBP13.36□□□□□ -0.27
UBAP1-201ENST00000297661 PMS2P11Q13670 270 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 HERPUD1Q15011 391 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 IQCJQ1A5X6 159 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 DCAF10Q5QP82 559 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 MEX3BQ6ZN04 569 aaKnown RBP13.36□□□□□ -0.27
UBAP1-201ENST00000297661 Q6ZPA2 131 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 AAED1Q7RTV5 226 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 ABHD3Q8WU67 409 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 GNPNAT1Q96EK6 184 aaPredicted RBP13.36□□□□□ -0.27
UBAP1-201ENST00000297661 GLRX2Q9NS18 164 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 P4HTMQ9NXG6 502 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 LRFN1Q9P244 771 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 DOCK7Q96N67 2140 aa13.36□□□□□ -0.27
UBAP1-201ENST00000297661 ZFP92A6NM28 416 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 A6NNC1 897 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 CBR3O75828 277 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 METTL15P1P0C7V9 234 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF883P0CG24 379 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 DYNLT3P51808 116 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 B3GALT5-AS1P59052 145 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 CLN3Q13286 438 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 IL11RAQ14626 422 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 EXT1Q16394 746 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF66Q6ZN08 573 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 MRPL41Q8IXM3 137 aaKnown RBP13.35□□□□□ -0.27
UBAP1-201ENST00000297661 TMEM252Q8N6L7 170 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 NAT6Q93015 286 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 PLEKHF2Q9H8W4 249 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 TMEM38BQ9NVV0 291 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 ST3GAL6Q9Y274 331 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 DMXL2Q8TDJ6 3036 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 C3orf80F5H4A9 247 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 SLC33A1O00400 549 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-201ENST00000297661 CA11O75493 328 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 CCL2P13500 99 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 CCNOP22674 350 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 TUBG1P23258 451 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 ZNF133P52736 654 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-201ENST00000297661 MLF1P58340 268 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 PPA1Q15181 289 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 MPV17LQ2QL34 196 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 RTL6Q6ICC9 239 aa13.35□□□□□ -0.27
UBAP1-201ENST00000297661 OPN3Q9H1Y3 402 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-201ENST00000297661 SH2D2AQ9NP31 389 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms