RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CCL28Q9NRJ3 127 aa11.7□□□□□ -0.54
HPS3-201ENST00000296051 AQP7P3A6NL99 342 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 CD8AP01732 235 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 MBPP02686 304 aaPredicted RBP11.69□□□□□ -0.54
HPS3-201ENST00000296051 CTXN2P0C2S0 81 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 GNG10P50151 68 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 DHRS7BQ6IAN0 325 aaPredicted RBP11.69□□□□□ -0.54
HPS3-201ENST00000296051 FAM58AQ8N1B3 248 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 GAPTQ8N292 157 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 OR10AD1Q8NGE0 317 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 WFIKKN1Q96NZ8 548 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 MS4A10Q96PG2 267 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
HPS3-201ENST00000296051 A0A1B0GV90 55 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 ZNF737O75373 536 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 CD74P04233 296 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 SLC25A6P12236 298 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 SPSB1Q96BD6 273 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 VWCEQ96DN2 955 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 LIPT2A6NK58 231 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 J3QRE1 110 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 TMPRSS2O15393 492 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 SEC11BP0C7V7 166 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 CALCRP30988 508 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 CDCP2Q5VXM1 449 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 WDR25Q64LD2 544 aaPredicted RBP11.69□□□□□ -0.54
HPS3-201ENST00000296051 OR10V1Q8NGI7 309 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 EDARADDQ8WWZ3 215 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 NTNG2Q96CW9 530 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 LRFN3Q9BTN0 628 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 TPPP3Q9BW30 176 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 TINAGQ9UJW2 476 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 FUT9Q9Y231 359 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 TRAPPC1Q9Y5R8 145 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 PHF3Q92576 2039 aaKnown RBP11.69□□□□□ -0.54
HPS3-201ENST00000296051 CLN5O75503 358 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 PPYP01298 95 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 PAX6P26367 422 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 P2RY1P47900 373 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 KRTCAP3Q53RY4 240 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 AQP3Q92482 292 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 CTHRC1Q96CG8 243 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 PARD6AQ9NPB6 346 aa11.69□□□□□ -0.54
HPS3-201ENST00000296051 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
HPS3-201ENST00000296051 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 HSBP1L1C9JCN9 74 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 ACAA1P09110 424 aaPredicted RBP11.68□□□□□ -0.54
HPS3-201ENST00000296051 COX5AP20674 150 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 SUB1P53999 127 aaKnown RBP eCLIP11.68□□□□□ -0.54
HPS3-201ENST00000296051 FAM78BQ5VT40 261 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 FDCSPQ8NFU4 85 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 ADAMTS17Q8TE56 1095 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 BSCL2Q96G97 398 aaPredicted RBP11.68□□□□□ -0.54
HPS3-201ENST00000296051 GPX7Q96SL4 187 aaPredicted RBP11.68□□□□□ -0.54
HPS3-201ENST00000296051 MS4A5Q9H3V2 200 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 CHODLQ9H9P2 273 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 DEFB108AA8MXU0 73 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 B2MP61769 119 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 KIAA2026Q5HYC2 2103 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 M0QZ24 198 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 PMCHP20382 165 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 ROM1Q03395 351 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 UNC119Q13432 240 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 SURF2Q15527 256 aaPredicted RBP11.68□□□□□ -0.54
HPS3-201ENST00000296051 CXorf66Q5JRM2 361 aaPredicted RBP11.68□□□□□ -0.54
HPS3-201ENST00000296051 STUMQ69YW2 141 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 GALMQ96C23 342 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 RAXQ9Y2V3 346 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 DHRS7CA6NNS2 312 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 HIST1H3AP68431 136 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 IZUMO4Q1ZYL8 232 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 C1orf100Q5SVJ3 147 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 GINS3Q9BRX5 216 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 RSG1Q9BU20 258 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 SLC7A10Q9NS82 523 aa11.68□□□□□ -0.54
HPS3-201ENST00000296051 F6UZH7 168 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 TIAF1O95411 115 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 NGFP01138 241 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 PGA4P0DJD7 388 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 PGA3P0DJD8 388 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 PGA5P0DJD9 388 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
HPS3-201ENST00000296051 HABP2Q14520 560 aaPredicted RBP11.67□□□□□ -0.54
HPS3-201ENST00000296051 LYG1Q8N1E2 194 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 GGACTQ9BVM4 153 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 SLC2A8Q9NY64 477 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 DXOO77932 396 aaKnown RBP11.67□□□□□ -0.54
HPS3-201ENST00000296051 OR8U8P0C7N1 319 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 ZNF708P17019 499 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 PHYHD1Q5SRE7 291 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 SIGLECL1Q8N7X8 197 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 OR2M3Q8NG83 312 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 OR52M1Q8NGK5 317 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 ZNF665Q9H7R5 613 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
HPS3-201ENST00000296051 GPR27Q9NS67 375 aa11.67□□□□□ -0.54
HPS3-201ENST00000296051 A0A0J9YW62 118 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms