RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 LCN2P80188 198 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 RBM39Q14498 530 aaKnown RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 MEF2DQ14814 521 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 CIARTQ8N365 385 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 OR5D13Q8NGL4 314 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 PPP1R35Q8TAP8 253 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ASB13Q8WXK3 278 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 MAFIPQ8WZ33 124 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 SSBP3Q9BWW4 388 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 FAM234AQ9H0X4 552 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
CCDC140-201ENST00000295226 C19orf12Q9NSK7 152 aa12.54□□□□□ -0.4
CCDC140-201ENST00000295226 FABP7O15540 132 aa12.53□□□□□ -0.4
CCDC140-201ENST00000295226 GSTP1P09211 210 aaKnown RBP12.53□□□□□ -0.4
CCDC140-201ENST00000295226 TBPP20226 339 aa12.53□□□□□ -0.4
CCDC140-201ENST00000295226 ESCO2Q56NI9 601 aa12.53□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF497Q6ZNH5 498 aa12.53□□□□□ -0.4
CCDC140-201ENST00000295226 GINS4Q9BRT9 223 aa12.53□□□□□ -0.4
CCDC140-201ENST00000295226 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
CCDC140-201ENST00000295226 YLPM1P49750 1951 aaKnown RBP12.53□□□□□ -0.4
CCDC140-201ENST00000295226 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
CCDC140-201ENST00000295226 CR1P17927 2039 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 H3BUI4 141 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 RAB3DO95716 219 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 CD74P04233 296 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 GLAP06280 429 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 RCC1P18754 421 aaPredicted RBP12.52□□□□□ -0.4
CCDC140-201ENST00000295226 GNG2P59768 71 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 ARL6IP1Q15041 203 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF626Q68DY1 528 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 GVQW1Q8N7I0 195 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 UBALD1Q8TB05 177 aa12.52□□□□□ -0.4
CCDC140-201ENST00000295226 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.4
CCDC140-201ENST00000295226 ZNF436Q9C0F3 470 aaPredicted RBP12.52□□□□□ -0.4
CCDC140-201ENST00000295226 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.4
CCDC140-201ENST00000295226 DSCAML1Q8TD84 2053 aa12.52□□□□□ -0.41
CCDC140-201ENST00000295226 WNK2Q9Y3S1 2297 aa12.52□□□□□ -0.41
CCDC140-201ENST00000295226 TMEM30CPA0ZSE6 113 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF736B4DX44 427 aaPredicted RBP12.51□□□□□ -0.41
CCDC140-201ENST00000295226 DISC1C4P0D8 188 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 C22orf46C9J442 243 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 CSN2P05814 226 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 S100A1P23297 94 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 P2RX3P56373 397 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 RPL31P62899 125 aaKnown RBP12.51□□□□□ -0.41
CCDC140-201ENST00000295226 SLC35E4Q6ICL7 350 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 TRAPPC6BQ86SZ2 158 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 OR13A1Q8NGR1 328 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 RAB39BQ96DA2 213 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 ST6GALNAC5Q9BVH7 336 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 FLVCR2Q9UPI3 526 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 CELSR1Q9NYQ6 3014 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 ODAMA1E959 279 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 SMAD7O15105 426 aaKnown RBP12.51□□□□□ -0.41
CCDC140-201ENST00000295226 NAPSAO96009 420 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 CD3DP04234 171 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 GSTT2P0CG29 244 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF273Q14593 569 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 PNLIPRP3Q17RR3 467 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF767PQ75MW2 155 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 TCF23Q7RTU1 214 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 FAM185AQ8N0U4 392 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 PRRT1Q99946 306 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 MMP26Q9NRE1 261 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 SLC2A8Q9NY64 477 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
CCDC140-201ENST00000295226 OTOGQ6ZRI0 2925 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 LOC105371242A0A075B767 164 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 IGKV1D-8A0A087WSZ0 117 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 H7C1Q1 480 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 GIPP09681 153 aaPredicted RBP12.5□□□□□ -0.41
CCDC140-201ENST00000295226 CXCL3P19876 107 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 C4BPBP20851 252 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 GLP1RP43220 463 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 KCNJ3P48549 501 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 RAP2BP61225 183 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 BEST4Q8NFU0 473 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 OR51S1Q8NGJ8 323 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF431Q8TF32 576 aaPredicted RBP12.5□□□□□ -0.41
CCDC140-201ENST00000295226 C12orf4Q9NQ89 552 aa12.5□□□□□ -0.41
CCDC140-201ENST00000295226 RPUSD1Q9UJJ7 312 aaKnown RBP12.5□□□□□ -0.41
CCDC140-201ENST00000295226 FLNAP21333 2647 aaKnown RBP12.49□□□□□ -0.41
CCDC140-201ENST00000295226 FCGR3AP08637 254 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 CCL3L1P16619 93 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 NPY4RP50391 375 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 LOXL1Q08397 574 aaPredicted RBP12.49□□□□□ -0.41
CCDC140-201ENST00000295226 FAAP20Q6NZ36 180 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 GAPTQ8N292 157 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 C9orf62Q8N4C0 152 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 ZNF69Q9UC07 566 aa12.49□□□□□ -0.41
CCDC140-201ENST00000295226 HSPB11Q9Y547 144 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms