RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CALHM1Q8IU99 346 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 PRR18Q8N4B5 295 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 MRPL30Q8TCC3 161 aaKnown RBP8.81□□□□□ -1
LMX1A-201ENST00000294816 ZNF845Q96IR2 970 aaPredicted RBP8.81□□□□□ -1
LMX1A-201ENST00000294816 CDCA3Q99618 268 aaPredicted RBP8.81□□□□□ -1
LMX1A-201ENST00000294816 TMEM208Q9BTX3 173 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 PARLQ9H300 379 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 NAGKQ9UJ70 344 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 DOCK11Q5JSL3 2073 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 RPLP1P05386 114 aaKnown RBP8.81□□□□□ -1
LMX1A-201ENST00000294816 B4GALT1P15291 398 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 CCKARP32238 428 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 CNN1P51911 297 aaKnown RBP8.81□□□□□ -1
LMX1A-201ENST00000294816 TMEM41BQ5BJD5 291 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 CYP2G1PQ6ZSU1 146 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 ANKRD37Q7Z713 158 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 TMEM256Q8N2U0 113 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 OR2M3Q8NG83 312 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 UBALD1Q8TB05 177 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 P2RX4Q99571 388 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 POLR3KQ9Y2Y1 108 aaPredicted RBP8.81□□□□□ -1
LMX1A-201ENST00000294816 MTCH2Q9Y6C9 303 aa8.81□□□□□ -1
LMX1A-201ENST00000294816 B4E171 279 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 KBTBD11O94819 623 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 PDGFBP01127 241 aaPredicted RBP8.8□□□□□ -1
LMX1A-201ENST00000294816 GYPAP02724 150 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 EGR1P18146 543 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 UCP1P25874 307 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 MSX1P28360 303 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 TSPAN7P41732 249 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 OR3A1P47881 315 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 RELQ04864 619 aaPredicted RBP8.8□□□□□ -1
LMX1A-201ENST00000294816 HIST3H3Q16695 136 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 ACOT6Q3I5F7 207 aaPredicted RBP8.8□□□□□ -1
LMX1A-201ENST00000294816 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 SEMA5BQ9P283 1151 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 CD207Q9UJ71 328 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 RAB4AP20338 218 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 MRPS21P82921 87 aaKnown RBP8.8□□□□□ -1
LMX1A-201ENST00000294816 SHHQ15465 462 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 SP5Q6BEB4 398 aaPredicted RBP8.8□□□□□ -1
LMX1A-201ENST00000294816 MAML2Q8IZL2 1156 aaPredicted RBP8.8□□□□□ -1
LMX1A-201ENST00000294816 NABP1Q96AH0 204 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 C10orf35Q96D05 121 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 SGCZQ96LD1 299 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 OR4C12Q96R67 309 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 PATZ1Q9HBE1 687 aaKnown RBP8.8□□□□□ -1
LMX1A-201ENST00000294816 PARD6AQ9NPB6 346 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 IL36RNQ9UBH0 155 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 RNF115Q9Y4L5 304 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 MYO15AQ9UKN7 3530 aa8.8□□□□□ -1
LMX1A-201ENST00000294816 ZNF816-ZNF321PA0A0X1KG74 233 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 A0A1W2PPC4 97 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 DLEU1O43261 78 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 SYNGR2O43760 224 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 PGLYRP1O75594 196 aaPredicted RBP8.79□□□□□ -1
LMX1A-201ENST00000294816 ZNF32P17041 273 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 HBG1P69891 147 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 HBG2P69892 147 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 Q6ZS52 159 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 ZNF525Q8N782 197 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 OR1F12Q8NHA8 337 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 MBD3L1Q8WWY6 194 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 ABHD14BQ96IU4 210 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 ALKBH3Q96Q83 286 aaPredicted RBP8.79□□□□□ -1
LMX1A-201ENST00000294816 RAB40CQ96S21 281 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 KCNS2Q9ULS6 477 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 PPP1R3CQ9UQK1 317 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 PAM16Q9Y3D7 125 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 PTRH2Q9Y3E5 179 aaKnown RBP8.79□□□□□ -1
LMX1A-201ENST00000294816 BCL3P20749 454 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 DRD1P21728 446 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 FUT6P51993 359 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 KCNIP4Q6PIL6 250 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 Q6ZRM9 215 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 TGIF2LYQ8IUE0 185 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 ADPRHL1Q8NDY3 354 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 OR10V1Q8NGI7 309 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 RNF150Q9ULK6 438 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 LAMA1P25391 3075 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 LRP4O75096 1905 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 TRAV39A0A0B4J263 110 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 C3orf80F5H4A9 247 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 HNF1AP20823 631 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 RAB35Q15286 201 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 OR8B8Q15620 311 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 ZNF468Q5VIY5 522 aaPredicted RBP8.79□□□□□ -1
LMX1A-201ENST00000294816 DMRTA1Q5VZB9 504 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 ABLIM2Q6H8Q1 611 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 DEFB126Q9BYW3 111 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 OR6C3Q9NZP0 311 aa8.79□□□□□ -1
LMX1A-201ENST00000294816 ERRFI1Q9UJM3 462 aaPredicted RBP8.79□□□□□ -1
LMX1A-201ENST00000294816 HS3ST1O14792 307 aa8.78□□□□□ -1
LMX1A-201ENST00000294816 CLDN1O95832 211 aa8.78□□□□□ -1
LMX1A-201ENST00000294816 HPRT1P00492 218 aa8.78□□□□□ -1
LMX1A-201ENST00000294816 DEFA4P12838 97 aa8.78□□□□□ -1
LMX1A-201ENST00000294816 IRF2P14316 349 aa8.78□□□□□ -1
LMX1A-201ENST00000294816 F2RP25116 425 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms