RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 K7ERU9 68 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 M0R2Z0 102 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 RPL24P83731 157 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 IFITM2Q01629 132 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 FOXO1Q12778 655 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR5D13Q8NGL4 314 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 MRPL24Q96A35 216 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC7A10Q9NS82 523 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 FUT9Q9Y231 359 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZFC3H1O60293 1989 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC22A20A6NK97 555 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 SOCS1O15524 211 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 DEDDO75618 318 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZNF32P17041 273 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 MRPL14Q6P1L8 145 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 TBC1D26Q86UD7 250 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR4F17Q8NGA8 305 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 PLXNB3Q9ULL4 1909 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 TRAV8-7A0A075B6U6 113 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 MICBQ29980 383 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR8B12Q8NGG6 310 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR6X1Q8NH79 312 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 KCNK15Q9H427 330 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 MSL2Q9HCI7 577 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 FLRT3Q9NZU0 649 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 MPV17LQ2QL34 196 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 COL5A1-AS1Q5SY13 56 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 RGS7BPQ6MZT1 257 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 CBLN3Q6UW01 205 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 ANKRD37Q7Z713 158 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC35E3Q7Z769 313 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 ATG4DQ86TL0 474 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 PUSL1Q8N0Z8 303 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 TP53BP1Q12888 1972 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 PDE6DO43924 150 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR2J3O76001 311 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 CD99P14209 185 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 CAMPP49913 170 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 CSRP3P50461 194 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 FAM3BP58499 235 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 LSM6P62312 80 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 MESTQ5EB52 335 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZNF774Q6NX45 483 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 FBLIM1Q8WUP2 373 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 ASB5Q8WWX0 329 aa10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 TECRQ9NZ01 308 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-201ENST00000293748 STAG3L2P0CL84 134 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZNF660Q6AZW8 331 aaPredicted RBP10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 SPSB2Q99619 263 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 PSG11Q9UQ72 335 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 ATP23Q9Y6H3 246 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 COL6A3P12111 3177 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 IGLV3-12A0A075B6K2 115 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 NEURL1O76050 574 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 PPYP01298 95 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 MMP16P51512 607 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 FAM209BQ5JX69 171 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR10AD1Q8NGE0 317 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 MOB3AQ96BX8 217 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 ST6GALNAC2Q9UJ37 374 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 MPC1Q9Y5U8 109 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZNF207O43670 478 aaKnown RBP10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 SEMA7AO75326 666 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 PPOXP50336 477 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 GUCA2BQ16661 112 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR11G2Q8NGC1 345 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 ADTRPQ96IZ2 230 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR1A1Q9P1Q5 309 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 TRAV17A0A0B4J275 112 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 CTXND1A0A1B0GTU2 59 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 A6NDN8 102 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 TRDCB7Z8K6 153 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 PABPC1L2AQ5JQF8 200 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 SPATA46Q5T0L3 261 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 LINC00518Q8N0U6 118 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 TMEM251Q8N6I4 163 aa10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 ESRP2Q9H6T0 727 aaKnown RBP10.34□□□□□ -0.75
SYNGAP1-201ENST00000293748 MFSD2BA6NFX1 497 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 SHISA8B8ZZ34 492 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 MPZL1O95297 269 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 MUC1P15941 1255 aaPredicted RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 ANKRD55Q3KP44 614 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 TSPO2Q5TGU0 170 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 PRSS41Q7RTY9 318 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 H1FOOQ8IZA3 346 aaPredicted RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR10AC1Q8NH08 325 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 TRMT61AQ96FX7 289 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR2D2Q9H210 308 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 RCC2Q9P258 522 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 A0A1W2PNU3 283 aaPredicted RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 A0A1W2PQD3 144 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 CT62P0C5K7 136 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 VSIG8P0DPA2 414 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms