RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 Q9H521 79 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 CALYQ9NYX4 217 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 PRR13Q9NZ81 148 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 VPREB3Q9UKI3 123 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 KCNK7Q9Y2U2 307 aa7.37□□□□□ -1.23
HMGN1-201ENST00000288344 MEIKINA0A087WXM9 373 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 A6NDX4 124 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 BUB1B-PAK6H3BSN5 160 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 HSPB6O14558 160 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 SOCS1O15524 211 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 CHST1O43916 411 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 CA11O75493 328 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 MDKP21741 143 aaPredicted RBP7.36□□□□□ -1.23
HMGN1-201ENST00000288344 SSTR5P35346 364 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 RAB13P51153 203 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF134P52741 427 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 OR10A3P58181 314 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 PROK1P58294 105 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 FOXL1Q12952 345 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 HABP2Q14520 560 aaPredicted RBP7.36□□□□□ -1.23
HMGN1-201ENST00000288344 TM4SF20Q53R12 229 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 OR52W1Q6IF63 320 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 RAB12Q6IQ22 244 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 OR2W3Q7Z3T1 314 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 Q8N2B8 174 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 LINC00311Q8N616 119 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 C8orf31Q8N9H6 132 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF439Q8NDP4 499 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 OR51D1Q8NGF3 324 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 OR5R1Q8NH85 324 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 LINC01006Q8NI28 216 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 KCNG3Q8TAE7 436 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 MRPL30Q8TCC3 161 aaKnown RBP7.36□□□□□ -1.23
HMGN1-201ENST00000288344 MRGPRDQ8TDS7 321 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 WIPF2Q8TF74 440 aaPredicted RBP7.36□□□□□ -1.23
HMGN1-201ENST00000288344 FCGR1BQ92637 280 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 GCDHQ92947 438 aaPredicted RBP7.36□□□□□ -1.23
HMGN1-201ENST00000288344 SULT4A1Q9BR01 284 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 DPAGT1Q9H3H5 408 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 GAL3ST2Q9H3Q3 398 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 SPACA1Q9HBV2 294 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 TXNL4BQ9NX01 149 aaKnown RBP7.36□□□□□ -1.23
HMGN1-201ENST00000288344 IDI2-AS1Q9NZ38 188 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 PSG11Q9UQ72 335 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 PEX16Q9Y5Y5 336 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 V9GY05 133 aa7.36□□□□□ -1.23
HMGN1-201ENST00000288344 TRBV6-6A0A0A6YYG2 114 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 TMEM30CPA0ZSE6 113 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 IFITM5A6NNB3 132 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 C12orf77C9JDV5 145 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 H3BUX3 64 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 J3QR06 171 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 RAB27BO00194 218 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 PDCD6O75340 191 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 CRTAPO75718 401 aaPredicted RBP7.35□□□□□ -1.23
HMGN1-201ENST00000288344 AMY1AP04745 511 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 AMY2AP04746 511 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 ARG1P05089 322 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 RCC1P18754 421 aaPredicted RBP7.35□□□□□ -1.23
HMGN1-201ENST00000288344 KIR2DS4P43632 304 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 PSMD7P51665 324 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF137PP52743 207 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 CLDN12P56749 244 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 DIAPH2-AS1Q14236 149 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 SSX2Q16385 188 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 LRRC75BQ2VPJ9 315 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 HLA-DRB5Q30154 266 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 Q3ZCU0 254 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 PLAC9Q5JTB6 97 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 LY6G6FQ5SQ64 297 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF554Q86TJ5 538 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 RFESDQ8TAC1 157 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 FAM46BQ96A09 425 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 FAM3DQ96BQ1 224 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 S100A13Q99584 98 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 FAAP24Q9BTP7 215 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 SLITRK2Q9H156 845 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 OR51E2Q9H255 320 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 ZNF696Q9H7X3 374 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 DPM3Q9P2X0 92 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 HSF4Q9ULV5 492 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 FAM96BQ9Y3D0 163 aa7.35□□□□□ -1.23
HMGN1-201ENST00000288344 TMEM272A0A1B0GTI8 110 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 MCRIP1C9JLW8 97 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 RRP9O43818 475 aaKnown RBP7.34□□□□□ -1.23
HMGN1-201ENST00000288344 MPIG6BO95866 241 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 HTR1DP28221 377 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 EFNB2P52799 333 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 RBM39Q14498 530 aaKnown RBP7.34□□□□□ -1.23
HMGN1-201ENST00000288344 P2RY14Q15391 338 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 ATAD3CQ5T2N8 411 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 C22orf42Q6IC83 251 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 GDPGP1Q6ZNW5 385 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 C6orf201Q7Z4U5 140 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 OR9G1Q8NH87 305 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 CFHR4Q92496 578 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 PTX4Q96A99 478 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 YIPF6Q96EC8 236 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 CST11Q9H112 138 aa7.34□□□□□ -1.23
HMGN1-201ENST00000288344 RNF167Q9H6Y7 350 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms