RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 BRS3P32247 399 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 TUSC5Q8IXB3 177 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 PGLYRP3Q96LB9 341 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 NDUFAF3Q9BU61 184 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 CHST5Q9GZS9 411 aa14.39□□□□□ -0.11
SH3RF1-201ENST00000284637 H0YL77 283 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 PPOXP50336 477 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 FUT5Q11128 374 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 TMEM211Q6ICI0 200 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 DHRS13Q6UX07 377 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 AMELYQ99218 206 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 FAM87AP0C7U9 286 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 CSRP3P50461 194 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 FOXL2P58012 376 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 C9orf40Q8IXQ3 194 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 TMEM183AQ8IXX5 376 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 RPEQ96AT9 228 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 TM4SF19Q96DZ7 209 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 CD74P04233 296 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 PSG2P11465 335 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 MMP9P14780 707 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 MRPS11P82912 194 aaKnown RBP14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 OR4S2Q8NH73 311 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 C10orf35Q96D05 121 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 TRAV17A0A0B4J275 112 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 FAM157CP0CG43 387 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 KLK2P20151 261 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 C3AR1Q16581 482 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 OR1L6Q8NGR2 347 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 TINAGQ9UJW2 476 aa14.38□□□□□ -0.11
SH3RF1-201ENST00000284637 IGKV1-8A0A0C4DH67 115 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 FOXS1O43638 330 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 IER3P46695 156 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 TGIF1Q15583 401 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 TUBA4BQ9H853 241 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 TMEM167BQ9NRX6 74 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 TECRQ9NZ01 308 aaKnown RBP14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 ONECUT1Q9UBC0 465 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 ZDHHC8Q9ULC8 765 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 OR2W1Q9Y3N9 320 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 GAGE10A6NGK3 116 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 FOXJ2Q9P0K8 574 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 R4GN57 208 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 CCDC88CQ9P219 2028 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 A0A1W2PN81 502 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 SNURFLB1AK76 121 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 LYZP61626 148 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 MESP2Q0VG99 397 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 TRA2AQ13595 282 aaKnown RBP eCLIP14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 OR1B1Q8NGR6 318 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 ABHD3Q8WU67 409 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 SMIM12Q96EX1 92 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 OR2H1Q9GZK4 316 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 FSCN3Q9NQT6 498 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 PIPOXQ9P0Z9 390 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 LOC390937A0A1W2PQ73 354 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 MKRN2OSH3BPM6 223 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 SRP14P37108 136 aaKnown RBP14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 SPATA45Q537H7 98 aa14.37□□□□□ -0.11
SH3RF1-201ENST00000284637 TNFAIP6P98066 277 aaPredicted RBP14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 MYOZ1Q9NP98 299 aaPredicted RBP14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 ZNF318Q5VUA4 2279 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 KIAA1217Q5T5P2 1943 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 CCL3P10147 92 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 COX7A1P24310 79 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 RPL13AP40429 203 aaKnown RBP14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 HERPUD1Q15011 391 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 CARFQ8N187 725 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 SF3B5Q9BWJ5 86 aaKnown RBP14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 EPHA8P29322 1005 aaPredicted RBP14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 KIR2DS2P43631 304 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 GLIPR1P48060 266 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 SSPNQ14714 243 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 CXXC4Q9H2H0 198 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 AHCTF1Q8WYP5 2266 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 DOCK1Q14185 1865 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 HAND1O96004 215 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 SAPCD1Q5SSQ6 148 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 PDPNQ86YL7 162 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 YBX2Q9Y2T7 364 aaKnown RBP14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 STRCQ7RTU9 1775 aa14.36□□□□□ -0.11
SH3RF1-201ENST00000284637 hADV38S2A0JD32 116 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 PDE6DO43924 150 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 DEDDO75618 318 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 EFNB1P98172 346 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 BPIFA4PQ86YQ2 179 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 SGMS2Q8NHU3 365 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 ZNF385AQ96PM9 386 aaKnown RBP14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 SEBOXQ9HB31 216 aaPredicted RBP14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 OR6C3Q9NZP0 311 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 ASAH2BP0C7U1 165 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 IL11P20809 199 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 KLF3P57682 345 aaPredicted RBP14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 ZNF260Q3ZCT1 412 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 C12orf54Q6X4T0 127 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 PCGF1Q9BSM1 259 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 TMEM204Q9BSN7 226 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 WIPI2Q9Y4P8 454 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 PITX3O75364 302 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms