RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TMEM252Q8N6L7 170 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 PYGO2Q9BRQ0 406 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 GPR61Q9BZJ8 451 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 A0A087X0M5 115 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TGIF2-C20orf24A0A0A6YYL0 155 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 A0A1B0GX30 115 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 H0YL77 283 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 GEMIN2O14893 280 aaKnown RBP8.85□□□□□ -0.99
UPF3B-201ENST00000276201 DFFBO76075 338 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 DBHP09172 617 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 SLC25A6P12236 298 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 FGF7P21781 194 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TAS2R30P59541 319 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 ID3Q02535 119 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 ENDOGQ14249 297 aaKnown RBP8.85□□□□□ -0.99
UPF3B-201ENST00000276201 CNN3Q15417 329 aaKnown RBP8.85□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF124Q15973 351 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF324BQ6AW86 544 aaPredicted RBP8.85□□□□□ -0.99
UPF3B-201ENST00000276201 ABLIM2Q6H8Q1 611 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 BEND4Q6ZU67 534 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 LHFPL2Q6ZUX7 228 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 CYB561D1Q8N8Q1 229 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM178AQ8NBL3 297 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 MBD3L1Q8WWY6 194 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 S100PBPQ96BU1 408 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF391Q9UJN7 358 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 RNF150Q9ULK6 438 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 FAM24AA6NFZ4 105 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 MPPED1O15442 326 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 CYB5BO43169 146 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TRGC2P03986 189 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 BTF3P20290 206 aaKnown RBP8.85□□□□□ -0.99
UPF3B-201ENST00000276201 CDAP32320 146 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 UQCRFS1P47985 274 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 NPBWR2P48146 333 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 SP6Q3SY56 376 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 AKR1C8PQ5T2L2 129 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A2PQ658T7 463 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM42Q69YG0 159 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF343Q6P1L6 599 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TGIF2LYQ8IUE0 185 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 SLC35G3Q8N808 338 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 FRZBQ92765 325 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 AGMATQ9BSE5 352 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 HDHD3Q9BSH5 251 aaPredicted RBP8.85□□□□□ -0.99
UPF3B-201ENST00000276201 PIGLQ9Y2B2 252 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 LIPGQ9Y5X9 500 aa8.85□□□□□ -0.99
UPF3B-201ENST00000276201 A0A0G2JMM0 328 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 C3orf85A0A1B0GTC6 90 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 A0A1B0GV90 55 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 A0A1W2PPB8 328 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 A0A1W2PRS3 328 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SMCO3A2RU48 225 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A10PA6NDY2 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A18PA6NE21 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A16PA6NEW6 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A20PA6NIJ5 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A8PA6NJQ4 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A7PA6NKC0 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A22PA8MWA6 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 KIR3DP1A8MWS1 328 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A12PA8MX19 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A5PA8MXJ8 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A23PA8MXZ1 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A15PP0C7V4 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A13PP0C7W8 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A14PP0C7W9 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAM90A24PP0C7X0 464 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAHP16930 419 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 GNLYP22749 145 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 GABRR1P24046 479 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 PTGDSP41222 190 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FBXW4P57775 412 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 HERV-K104P61576 105 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 MRPL49Q13405 166 aaKnown RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 HNF4GQ14541 408 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 RSPO1Q2MKA7 263 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 DPPA2Q7Z7J5 298 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 CENPVQ7Z7K6 275 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 ODF3L1Q8IXM7 274 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 OR5D18Q8NGL1 313 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM171Q8WVE6 324 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 TOMM40LQ969M1 308 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SPACA9Q96E40 222 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 ATP5SQ99766 215 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 HIST1H2BLQ99880 126 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FAAP24Q9BTP7 215 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SRD5A3Q9H8P0 318 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 DEPPQ9NTK1 212 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 KLF13Q9Y2Y9 288 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 FLNCQ14315 2725 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 KIAA1549Q9HCM3 1950 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 NKX2-6A6NCS4 301 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 PHF1O43189 567 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 LY86O95711 162 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 GCGP01275 180 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms