RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 NUDT3O95989 172 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 HAND1O96004 215 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 TTRP02766 147 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 HIST1H1TP22492 207 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-201ENST00000274071 CBLN1P23435 193 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 AMTP48728 403 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 Q0VG73 95 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 MUC21Q5SSG8 566 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 BVES-AS1Q5T3Y7 98 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 NEGR1Q7Z3B1 354 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 PECRQ9BY49 303 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 BANF2Q9H503 90 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 IGKV1D-8A0A087WSZ0 117 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 A0A1W2PP11 408 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 GAGE10A6NGK3 116 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 BGLAPP02818 100 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 POU2F2P09086 479 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 IGLL1P15814 213 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF133P52736 654 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 CTXN1P60606 82 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 RELBQ01201 579 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ZP4Q12836 540 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ODF1Q14990 250 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF658BQ4V348 819 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ASTLQ6HA08 431 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 MRPL21Q7Z2W9 205 aaKnown RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ZAR1Q86SH2 424 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 SLC22A24Q8N4F4 322 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ARHGEF39Q8N4T4 335 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 LRTM2Q8N967 370 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 SUMF1Q8NBK3 374 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 SGMS2Q8NHU3 365 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 BADQ92934 168 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 NPVFQ9HCQ7 196 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 FAM60AQ9NP50 221 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 SLC33A1O00400 549 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 CELA3BP08861 270 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 OPRM1P35372 400 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF154Q13106 437 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 SRSF7Q16629 238 aaKnown RBP eCLIP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 ITPRIPL2Q3MIP1 535 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 UFSP1Q6NVU6 142 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 HAPLN4Q86UW8 402 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 MRPL30Q8TCC3 161 aaKnown RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 RTN4IP1Q8WWV3 396 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 MSI2Q96DH6 328 aaKnown RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 NAA60Q9H7X0 242 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 PELI2Q9HAT8 420 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 FBLN5Q9UBX5 448 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 HS3ST2Q9Y278 367 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 EMC9Q9Y3B6 208 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 HCFC2Q9Y5Z7 792 aa7.93□□□□□ -1.14
PDGFC-201ENST00000274071 TCF20Q9UGU0 1960 aaKnown RBP7.93□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM250H0YL14 139 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM50AO95807 157 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 HLA-DQA2P01906 255 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 EMDP50402 254 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 TESK1Q15569 626 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 LIAT1Q6ZQX7 453 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 DAZLQ92904 295 aaKnown RBP7.92□□□□□ -1.14
PDGFC-201ENST00000274071 SPACA5Q96QH8 159 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 RTN4RQ9BZR6 473 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 NKX2-4Q9H2Z4 354 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 LIME1Q9H400 295 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 DECR2Q9NUI1 292 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 B3GALT1Q9Y5Z6 326 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 LINC01553A4QN01 128 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 SSSCA1O60232 199 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 IFNA1P01562 189 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 OR10J4P0C629 311 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF20P17024 532 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 ROM1Q03395 351 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 IGFBP7Q16270 282 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 GLIPR1L1Q6UWM5 242 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 LRRC75AQ8NAA5 344 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 LIN37Q96GY3 246 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-201ENST00000274071 SIGLEC12Q96PQ1 595 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 MRPL18Q9H0U6 180 aaKnown RBP7.92□□□□□ -1.14
PDGFC-201ENST00000274071 THYN1Q9P016 225 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 SCN2AQ99250 2005 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 DOCK11Q5JSL3 2073 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 TRAV9-2A0A087WT02 112 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 LOC101059948A0A1B0GTJ6 334 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 SHISA7A6NL88 538 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 J3KRW8 73 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 HCRTR1O43613 425 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 ECI1P42126 302 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 PSG4Q00888 419 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 ALG10Q5BKT4 473 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM240Q5SV17 173 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 STUMQ69YW2 141 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 C22orf39Q6P5X5 142 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 IRF7Q92985 503 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 CHRDL1Q9BU40 450 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 LRRC61Q9BV99 259 aa7.92□□□□□ -1.14
PDGFC-201ENST00000274071 MBNL1Q9NR56 388 aaKnown RBP7.92□□□□□ -1.14
PDGFC-201ENST00000274071 PEF1Q9UBV8 284 aaKnown RBP7.92□□□□□ -1.14
PDGFC-201ENST00000274071 SPAARA0A1B0GVQ0 90 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 A0A1W2PS18 150 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms