RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TMEM106BQ9NUM4 274 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 OR1A1Q9P1Q5 309 aa13.65□□□□□ -0.22
TPM1-201ENST00000267996 ODAMA1E959 279 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 IFNA2P01563 188 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 DNASE1P24855 282 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 ABCA11PQ4W5N1 156 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 Q5BKY6 102 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 LDLRAD3Q86YD5 345 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 FAM185AQ8N0U4 392 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 CCDC71LQ8N9Z2 235 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 OR5D13Q8NGL4 314 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 OR13A1Q8NGR1 328 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 OR1L1Q8NH94 360 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 RTN4IP1Q8WWV3 396 aaPredicted RBP13.64□□□□□ -0.23
TPM1-201ENST00000267996 IL1F10Q8WWZ1 152 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 FAM234AQ9H0X4 552 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 ZNF665Q9H7R5 613 aa13.64□□□□□ -0.23
TPM1-201ENST00000267996 TRAV38-1A0A0B4J264 116 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 RGS11O94810 467 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 PPOXP50336 477 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 P2RX3P56373 397 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 PHLDA2Q53GA4 152 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 DEFB108BQ8NET1 73 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 MRGPRDQ8TDS7 321 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 GALMQ96C23 342 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 SLC5A7Q9GZV3 580 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 DNTTIP1Q9H147 329 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 RAB18Q9NP72 206 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 FBXO9Q9UK97 447 aaPredicted RBP13.63□□□□□ -0.23
TPM1-201ENST00000267996 ZFYVE26Q68DK2 2539 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 TEX13DA0A0J9YY54 714 aaPredicted RBP13.63□□□□□ -0.23
TPM1-201ENST00000267996 C15orf65H3BRN8 121 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 GPR31O00270 319 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 TNFRSF13BO14836 293 aaPredicted RBP13.63□□□□□ -0.23
TPM1-201ENST00000267996 SIGLEC5O15389 551 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 CD8AP01732 235 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 HBZP02008 142 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 GYPAP02724 150 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 EDDM3AQ14507 147 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 LAMTOR1Q6IAA8 161 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 KCTD9Q7L273 389 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 ZNF565Q8N9K5 539 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 KCNIP3Q9Y2W7 256 aa13.63□□□□□ -0.23
TPM1-201ENST00000267996 PPIAL4EA0A075B759 164 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 A0A1B0GW55 424 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 PPIAL4DF5H284 164 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 C19orf84I3L1E1 186 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 MPPED1O15442 326 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4L2P0CJ85 424 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4L3P0CJ86 424 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4L4P0CJ87 422 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4L5P0CJ88 424 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4L6P0CJ89 424 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4L7P0CJ90 424 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 PPIAL4FP0DN26 164 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 SELLP14151 372 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 GZMHP20718 246 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 TMEM187Q14656 261 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 C11orf71Q6IPW1 123 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4L9Q6RFH8 374 aaPredicted RBP13.62□□□□□ -0.23
TPM1-201ENST00000267996 ZNF818PQ6ZRF7 136 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 PRR18Q8N4B5 295 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 OR10V1Q8NGI7 309 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 CCL17Q92583 94 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 CCL13Q99616 98 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DCTN5Q9BTE1 182 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 SUCNR1Q9BXA5 334 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 CCL28Q9NRJ3 127 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 RDH8Q9NYR8 311 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 PRR13Q9NZ81 148 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 DUX4Q9UBX2 424 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 PPIAL4AQ9Y536 164 aa13.62□□□□□ -0.23
TPM1-201ENST00000267996 RAI1Q7Z5J4 1906 aaPredicted RBP13.61□□□□□ -0.23
TPM1-201ENST00000267996 IGHV1-69-2A0A0G2JMI3 117 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 CCSO14618 274 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 HSPA12AO43301 675 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 CGB3P0DN86 165 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 CGB7P0DN87 165 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 IL2RGP31785 369 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 CEACAM6P40199 344 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 HTD2P86397 168 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 C9orf62Q8N4C0 152 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 BVESQ8NE79 360 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 C14orf79Q96F83 325 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 CBLN4Q9NTU7 201 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
TPM1-201ENST00000267996 PRB1P04280 392 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 WNT2P09544 360 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 LUMP51884 338 aaPredicted RBP13.6□□□□□ -0.23
TPM1-201ENST00000267996 DTX2Q86UW9 622 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 ZNF843Q8N446 348 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 FAM216BQ8N7L0 139 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 LRTM2Q8N967 370 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 ARL11Q969Q4 196 aa13.6□□□□□ -0.23
TPM1-201ENST00000267996 PARP12Q9H0J9 701 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms