RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MMP23AO75900 390 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 FPR2P25090 351 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 PRSS3P35030 304 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 CBX5P45973 191 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 UBE2E1P51965 193 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 MRPS10P82664 201 aaKnown RBP11.66□□□□□ -0.54
SSBP1-201ENST00000265304 FAM120AOSQ5T036 256 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 NCR3LG1Q68D85 454 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 CCDC107Q8WV48 283 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 ARL11Q969Q4 196 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 DIRAS2Q96HU8 199 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-201ENST00000265304 HEXA-AS1Q9H8Q6 139 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 YAE1D1Q9NRH1 226 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 PTTG2Q9NZH5 202 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 ONECUT1Q9UBC0 465 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 EXTL2Q9UBQ6 330 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 SESN1Q9Y6P5 492 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 TRAV39A0A0B4J263 110 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 TRDCB7Z8K6 153 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 HBZP02008 142 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 SSTR5P35346 364 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 TALDO1P37837 337 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 GDNFP39905 211 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 GLP1RP43220 463 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 GNG2P59768 71 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 ARFRP1Q13795 201 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 KIR2DS1Q14954 304 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 VMO1Q7Z5L0 202 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 TRAPPC6BQ86SZ2 158 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 HOGA1Q86XE5 327 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 OR4A4PQ8NGN8 299 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 NUDCD2Q8WVJ2 157 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 TMEM133Q9H2Q1 129 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 IDI2-AS1Q9NZ38 188 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 KCNIP1Q9NZI2 227 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 RBMX2Q9Y388 322 aaKnown RBP11.65□□□□□ -0.54
SSBP1-201ENST00000265304 NF1P21359 2839 aa11.65□□□□□ -0.54
SSBP1-201ENST00000265304 MEIOCA2RUB1 952 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 ODF3BA8MYP8 253 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 FAM25AB3EWG3 89 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 FAM25CB3EWG5 89 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 FAM25GB3EWG6 89 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 SPINT2O43291 252 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 GSTZ1O43708 216 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-201ENST00000265304 YPEL1O60688 119 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 LPLP06858 475 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 HOXB4P17483 251 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-201ENST00000265304 S100A5P33763 92 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 HLA-DRB3P79483 266 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 SSBP1Q04837 148 aaKnown RBP11.64□□□□□ -0.55
SSBP1-201ENST00000265304 ZNF626Q68DY1 528 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 IZUMO1Q8IYV9 350 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 LINC00311Q8N616 119 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 NANPQ8TBE9 248 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 GALMQ96C23 342 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 YPEL2Q96QA6 119 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 PRDM13Q9H4Q3 707 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 ING3Q9NXR8 418 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 ZNF107Q9UII5 783 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-201ENST00000265304 V9GYH0 126 aa11.64□□□□□ -0.55
SSBP1-201ENST00000265304 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 TRBV6-7A0A0A0MS04 114 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 IGKV1-6A0A0C4DH72 117 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 GABARAPH6UMI1 98 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 CTXN2P0C2S0 81 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 PTHLHP12272 177 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 MRPS15P82914 257 aaKnown RBP11.63□□□□□ -0.55
SSBP1-201ENST00000265304 HERPUD1Q15011 391 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 MIDNQ504T8 468 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 ZNF439Q8NDP4 499 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 BEND2Q8NDZ0 799 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 OR1L1Q8NH94 360 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 RFESDQ8TAC1 157 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 FAM216AQ8WUB2 273 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 SMIM4Q8WVI0 70 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 AJUBAQ96IF1 538 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 PCGF1Q9BSM1 259 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 MTFP1Q9UDX5 166 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-201ENST00000265304 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 CDC42EP3Q9UKI2 254 aa11.63□□□□□ -0.55
SSBP1-201ENST00000265304 IGHV1-69DA0A0B4J2H0 117 aa11.62□□□□□ -0.55
SSBP1-201ENST00000265304 MEX3AA1L020 520 aaKnown RBP11.62□□□□□ -0.55
SSBP1-201ENST00000265304 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
SSBP1-201ENST00000265304 FABP7O15540 132 aa11.62□□□□□ -0.55
SSBP1-201ENST00000265304 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
SSBP1-201ENST00000265304 SCTP09683 121 aa11.62□□□□□ -0.55
SSBP1-201ENST00000265304 OMGP23515 440 aa11.62□□□□□ -0.55
SSBP1-201ENST00000265304 MORN2Q502X0 79 aa11.62□□□□□ -0.55
SSBP1-201ENST00000265304 PRAMEF5Q5TYX0 476 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms