RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ZNF891A8MT65 544 aaPredicted RBP17.08■□□□□ 0.32
CSPG5-201ENST00000264723 H0YL77 283 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 GFRALQ6UXV0 394 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 FAM185AQ8N0U4 392 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 FGFBP3Q8TAT2 258 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 CABLES2Q9BTV7 478 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 RSG1Q9BU20 258 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 WNT5BQ9H1J7 359 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 DEPPQ9NTK1 212 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 GPR12P47775 334 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 UBE2G2P60604 165 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 FAM3AP98173 230 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 TMEM252Q8N6L7 170 aa17.08■□□□□ 0.32
CSPG5-201ENST00000264723 RIMS4Q9H426 269 aaPredicted RBP17.08■□□□□ 0.32
CSPG5-201ENST00000264723 C9orf172C9J069 976 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 SRSF10O75494 262 aaKnown RBP17.07■□□□□ 0.32
CSPG5-201ENST00000264723 PSG2P11465 335 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 DTYMKP23919 212 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 QRFPP83859 136 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 PLEKHA3Q9HB20 300 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 CYTL1Q9NRR1 136 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 NPIPB13A6NJU9 1138 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 NPIPB4C9JG80 1138 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 ATXN7O15265 892 aaPredicted RBP17.07■□□□□ 0.32
CSPG5-201ENST00000264723 HEXAP06865 529 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 ADCYAP1P18509 176 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 SMIM7Q9BQ49 75 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 USF3Q68DE3 2245 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 H3BQ15 152 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 HOXA1P49639 335 aaPredicted RBP17.07■□□□□ 0.32
CSPG5-201ENST00000264723 CYB561D1Q8N8Q1 229 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 DDA1Q9BW61 102 aa17.07■□□□□ 0.32
CSPG5-201ENST00000264723 CYC1P08574 325 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 C9orf152Q5JTZ5 239 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 OR4F5Q8NH21 305 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 OR4F4Q96R69 305 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 MIOXQ9UGB7 285 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 NCOA6Q14686 2063 aaPredicted RBP17.06■□□□□ 0.32
CSPG5-201ENST00000264723 ZFP36L1Q07352 338 aaKnown RBP17.06■□□□□ 0.32
CSPG5-201ENST00000264723 TMEM187Q14656 261 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 SMIM21Q3B7S5 101 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 C15orf54Q8N8G6 183 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 SSX3Q99909 188 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 OPA3Q9H6K4 179 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 TAAR3PQ9P1P4 343 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 SPG11Q96JI7 2443 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 CREBBPQ92793 2442 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 SEC11BP0C7V7 166 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 VDAC1P21796 283 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 DEFA6Q01524 100 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 AURKAIP1Q9NWT8 199 aaPredicted RBP17.06■□□□□ 0.32
CSPG5-201ENST00000264723 CACFD1Q9UGQ2 172 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 ACP1P24666 158 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 LRRC29Q8WV35 223 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 TVP23CQ96ET8 276 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 SLC25A22Q9H936 323 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 NGBQ9NPG2 151 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 PSG11Q9UQ72 335 aa17.06■□□□□ 0.32
CSPG5-201ENST00000264723 A0A1W2PPQ1 181 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 OR5B21A6NL26 309 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 CSRP1P21291 193 aaKnown RBP17.05■□□□□ 0.32
CSPG5-201ENST00000264723 DLK1P80370 383 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 RAB31Q13636 194 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 BTNL3Q6UXE8 466 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 MPC1Q9Y5U8 109 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 LRP5LA4QPB2 252 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 HLA-GP17693 338 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 RAB4BP61018 213 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 TRDCB7Z8K6 153 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 ZNF343Q6P1L6 599 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 ZNF826PQ6ZT77 177 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 FADS6Q8N9I5 356 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 FDCSPQ8NFU4 85 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 TOLLIPQ9H0E2 274 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 POMT1Q9Y6A1 747 aa17.05■□□□□ 0.32
CSPG5-201ENST00000264723 FABP4P15090 132 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 TRBV23-1A0A0A0MS06 115 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 LY86O95711 162 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 S100A8P05109 93 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 MMP9P14780 707 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 PTGDSP41222 190 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 CISD2Q8N5K1 135 aaKnown RBP17.04■□□□□ 0.32
CSPG5-201ENST00000264723 HIST1H2BAQ96A08 127 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 C10orf35Q96D05 121 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 LAMP3Q9UQV4 416 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 NAT2P11245 290 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 ZNF818PQ6ZRF7 136 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 UBAC2Q8NBM4 344 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 PRO1933Q9H354 126 aa17.04■□□□□ 0.32
CSPG5-201ENST00000264723 IGKV1-12A0A0C4DH73 117 aa17.03■□□□□ 0.32
CSPG5-201ENST00000264723 PINLYPA6NC86 204 aa17.03■□□□□ 0.32
CSPG5-201ENST00000264723 IGKV1D-12P01611 117 aa17.03■□□□□ 0.32
CSPG5-201ENST00000264723 TMEM211Q6ICI0 200 aa17.03■□□□□ 0.32
CSPG5-201ENST00000264723 KIAA1549LQ6ZVL6 1849 aa17.03■□□□□ 0.32
CSPG5-201ENST00000264723 TMEM30CPA0ZSE6 113 aa17.03■□□□□ 0.32
CSPG5-201ENST00000264723 RAB9BQ9NP90 201 aa17.03■□□□□ 0.32
CSPG5-201ENST00000264723 PNRC2Q9NPJ4 139 aaKnown RBP17.03■□□□□ 0.32
CSPG5-201ENST00000264723 FOXG1P55316 489 aaPredicted RBP17.03■□□□□ 0.32
CSPG5-201ENST00000264723 NTNG2Q96CW9 530 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms