RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 MKRN2OSH3BPM6 223 aa14.1□□□□□ -0.15
GPC1-201ENST00000264039 SHBQ15464 509 aa14.1□□□□□ -0.15
GPC1-201ENST00000264039 OR6X1Q8NH79 312 aa14.1□□□□□ -0.15
GPC1-201ENST00000264039 POC1BQ8TC44 478 aa14.1□□□□□ -0.15
GPC1-201ENST00000264039 TICRRQ7Z2Z1 1910 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 MPLP40238 635 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 RPL19P84098 196 aaKnown RBP14.09□□□□□ -0.15
GPC1-201ENST00000264039 PDLIM3Q53GG5 364 aaPredicted RBP14.09□□□□□ -0.15
GPC1-201ENST00000264039 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 NDUFB4O95168 129 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 TRIM61Q5EBN2 209 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 TSTD1Q8NFU3 115 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 CADM4Q8NFZ8 388 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 ACY3Q96HD9 319 aa14.09□□□□□ -0.15
GPC1-201ENST00000264039 SYNGR2O43760 224 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 CXCL10P02778 98 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 PSG2P11465 335 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 PLA2G5P39877 138 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 MKXQ8IYA7 352 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 IFI44Q8TCB0 444 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 OR4C12Q96R67 309 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 TMEM222Q9H0R3 208 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 LPAR2Q9HBW0 351 aa14.08□□□□□ -0.15
GPC1-201ENST00000264039 GCH1P30793 250 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 MSMO1Q15800 293 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 LEMD1Q68G75 181 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 ARL6IP6Q8N6S5 226 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 ZNF611Q8N823 705 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 ACTR3CQ9C0K3 210 aaPredicted RBP14.08□□□□□ -0.16
GPC1-201ENST00000264039 C1QTNF9BB2RNN3 333 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 TRAPPC2LH3BP13 241 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 ZNF816Q0VGE8 651 aaPredicted RBP14.08□□□□□ -0.16
GPC1-201ENST00000264039 EIF3IQ13347 325 aaKnown RBP14.08□□□□□ -0.16
GPC1-201ENST00000264039 PARM1Q6UWI2 310 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 D2HGDHQ8N465 521 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 NEIL1Q96FI4 390 aaPredicted RBP14.08□□□□□ -0.16
GPC1-201ENST00000264039 CLCF1Q9UBD9 225 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 POLR3KQ9Y2Y1 108 aaPredicted RBP14.08□□□□□ -0.16
GPC1-201ENST00000264039 USP34Q70CQ2 3546 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 LRRK1Q38SD2 2015 aa14.08□□□□□ -0.16
GPC1-201ENST00000264039 A8MXE2 369 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 BCAT2O15382 392 aaPredicted RBP14.07□□□□□ -0.16
GPC1-201ENST00000264039 PDCD6O75340 191 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 COL9A1P20849 921 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 RPL23P62829 140 aaKnown RBP14.07□□□□□ -0.16
GPC1-201ENST00000264039 IL15RAQ13261 267 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 ADPRHL1Q8NDY3 354 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 AP1S3Q96PC3 154 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 TRAPPC2LQ9UL33 140 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 CCL2P13500 99 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 TDRG1Q3Y452 100 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 FAM90A2PQ658T7 463 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 ZNF818PQ6ZRF7 136 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.07□□□□□ -0.16
GPC1-201ENST00000264039 OR1L6Q8NGR2 347 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 MSI2Q96DH6 328 aaKnown RBP14.07□□□□□ -0.16
GPC1-201ENST00000264039 TBX21Q9UL17 535 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 NOTCH4Q99466 2003 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 PCNX3Q9H6A9 2034 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 SLC25A6P12236 298 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 SNAI3Q3KNW1 292 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 SPATA45Q537H7 98 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 TOX2Q96NM4 488 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 PLA2G2FQ9BZM2 168 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 ASCL3Q9NQ33 180 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 CACNA1EQ15878 2313 aa14.07□□□□□ -0.16
GPC1-201ENST00000264039 TRBV24-1A0A075B6N3 115 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 GZMHP20718 246 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 RANP62826 216 aaKnown RBP14.06□□□□□ -0.16
GPC1-201ENST00000264039 PARD6GQ9BYG4 376 aaPredicted RBP14.06□□□□□ -0.16
GPC1-201ENST00000264039 GPR27Q9NS67 375 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 CISD1Q9NZ45 108 aaKnown RBP14.06□□□□□ -0.16
GPC1-201ENST00000264039 AQP7P3A6NL99 342 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 SNURFLB1AK76 121 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
GPC1-201ENST00000264039 COX5AP20674 150 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 PHYHD1Q5SRE7 291 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 ZDHHC23Q8IYP9 409 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 OR2V1Q8NHB1 315 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 ZCCHC14Q8WYQ9 949 aaKnown RBP14.06□□□□□ -0.16
GPC1-201ENST00000264039 BLACEA4D250 179 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 LIPT2A6NK58 231 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 ZNF253O75346 499 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 CCL5P13501 91 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 RABIFP47224 123 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 SRYQ05066 204 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 OR10G3Q8NGC4 313 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 MRGPRX1Q96LB2 322 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 DOCK10Q96BY6 2186 aa14.06□□□□□ -0.16
GPC1-201ENST00000264039 ZNF106Q9H2Y7 1883 aaKnown RBP14.06□□□□□ -0.16
GPC1-201ENST00000264039 MRPL21Q7Z2W9 205 aaKnown RBP14.05□□□□□ -0.16
GPC1-201ENST00000264039 SELENOHQ8IZQ5 122 aaKnown RBP14.05□□□□□ -0.16
GPC1-201ENST00000264039 OR10P1Q8NGE3 313 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 PRRG4Q9BZD6 226 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 MTCH2Q9Y6C9 303 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 FER1L5A0AVI2 2057 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 HTTP42858 3142 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 ZNF17P17021 662 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 ANOS1P23352 680 aa14.05□□□□□ -0.16
GPC1-201ENST00000264039 GPM6AP51674 278 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms