RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SMPD2O60906 423 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 OR2I1PQ8NGU4 316 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 PIPOXQ9P0Z9 390 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 CACNA1GO43497 2377 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 ZNF253O75346 499 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 PRSS23O95084 383 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 BHLHA15Q7RTS1 189 aaPredicted RBP15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 FAM219AQ8IW50 185 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 RSRP1Q9BUV0 290 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 MSL2Q9HCI7 577 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 PTP4A1Q93096 173 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 CES1P1Q9UKY3 287 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 LINC01565O15544 149 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 PSG5Q15238 335 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 C12orf54Q6X4T0 127 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 MED19A0JLT2 244 aaPredicted RBP15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 LMX1BO60663 402 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 CDS2O95674 445 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 FAM3BP58499 235 aaPredicted RBP15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 CLEC18BQ6UXF7 455 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 CDX4O14627 284 aaPredicted RBP15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 PLP1P60201 277 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 RHBDD2Q6NTF9 364 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 NFAM1Q8NET5 270 aaPredicted RBP15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 SAP30LQ9HAJ7 183 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 PITX3O75364 302 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 ARG1P05089 322 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 MYF5P13349 255 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 CCL2P13500 99 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 METAP1P53582 386 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 ISXQ2M1V0 245 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 SERGEFQ9UGK8 458 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 OR2W1Q9Y3N9 320 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 ZNF683Q8IZ20 524 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 COA4Q9NYJ1 87 aa15.37■□□□□ 0.05
NOTCH3-201ENST00000263388 MPZL1O95297 269 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 CA2P00918 260 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 RNF122Q9H9V4 155 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 NCKAP5O14513 1909 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 MVDP53602 400 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 LIPT2A6NK58 231 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 DHRS7CA6NNS2 312 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 TNXAQ16473 311 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 LGALSLQ3ZCW2 172 aaPredicted RBP15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 IGHV3-43A0A0B4J1X8 118 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 A0A1B0GTH9 108 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 IGHV3-43DP0DP04 118 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 GZMHP20718 246 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 SPINK14Q6IE38 97 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 BTF3P20290 206 aaKnown RBP15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 KIR3DL2P43630 455 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 CSN3P07498 182 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 HOXA6P31267 233 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 C21orf62-AS1Q17RA5 79 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 SNRNP40Q96DI7 357 aaKnown RBP15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 PARP11Q9NR21 331 aa15.36■□□□□ 0.05
NOTCH3-201ENST00000263388 TCF20Q9UGU0 1960 aaKnown RBP15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 CISD3P0C7P0 127 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 RTP5Q14D33 572 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 ATG4DQ86TL0 474 aaPredicted RBP15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 TEPPQ6URK8 271 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 ASB5Q8WWX0 329 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 TRAF4Q9BUZ4 470 aaPredicted RBP15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 TMEM210A6NLX4 147 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 M0R296 226 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 ADAP1O75689 374 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 C10orf113Q5VZT2 155 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 OR8B3Q8NGG8 313 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 LINC00052Q96N35 136 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 OR8B2Q96RD0 313 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 A0A1W2PR80 420 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 FFAR1O14842 300 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 SRSF10O75494 262 aaKnown RBP15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 C1orf174Q8IYL3 243 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 TBX15Q96SF7 602 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 DIRC2Q96SL1 478 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 NUDT16L1Q9BRJ7 211 aaKnown RBP15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 CBLN3Q6UW01 205 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 CHST5Q9GZS9 411 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 GREB1LQ9C091 1923 aaPredicted RBP15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 CA11O75493 328 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 CT62P0C5K7 136 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 GAPTQ8N292 157 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 MIOXQ9UGB7 285 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 IL17BQ9UHF5 180 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 ZSWIM8A7E2V4 1837 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 OR4P4Q8NGL7 312 aa15.35■□□□□ 0.05
NOTCH3-201ENST00000263388 SRP14P37108 136 aaKnown RBP15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 MRPS11P82912 194 aaKnown RBP15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 GABRA6Q16445 453 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 OR11H7Q8NGC8 314 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 SSX8Q7RTT4 187 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 VN1R17PQ8TDU5 208 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 LPAR5Q9H1C0 372 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 COX7A1P24310 79 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 PTX4Q96A99 478 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 MRGPRFQ96AM1 343 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 PMELP40967 661 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 SLC52A3Q9NQ40 469 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms