RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 MUC6Q6W4X9 2439 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 ZNF716A6NP11 495 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 CD300LBA8K4G0 201 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 K7ESF4 209 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 CDS2O95674 445 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 RAB1AP62820 205 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 PLP2Q04941 152 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 COTL1Q14019 142 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 SPANXN5Q5MJ07 72 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 OR8G2PQ6IF36 304 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 OR10J5Q8NHC4 309 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 ATG101Q9BSB4 218 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 PLK3Q9H4B4 646 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 DEPPQ9NTK1 212 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 TGIF2-C20orf24A0A0A6YYL0 155 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 TUSC2O75896 110 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 TMEM50AO95807 157 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 CELA3AP09093 270 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 PSG2P11465 335 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 SPCS3P61009 180 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 TLE4Q04727 773 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 ZNF239Q16600 458 aaKnown RBP10.85□□□□□ -0.67
LIG1-201ENST00000263274 TRIM61Q5EBN2 209 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 THOC3Q96J01 351 aaKnown RBP10.85□□□□□ -0.67
LIG1-201ENST00000263274 WDR54Q9H977 334 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 EXPH5Q8NEV8 1989 aa10.85□□□□□ -0.67
LIG1-201ENST00000263274 CEP192Q8TEP8 1941 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 PINLYPA6NC86 204 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 SIRPB1O00241 398 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 FGF5P12034 268 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 VDAC1P21796 283 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 OR2T2Q6IF00 324 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 REC114Q7Z4M0 266 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 M1APQ8TC57 530 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 RIMS4Q9H426 269 aaPredicted RBP10.84□□□□□ -0.67
LIG1-201ENST00000263274 ZNF552Q9H707 407 aaPredicted RBP10.84□□□□□ -0.67
LIG1-201ENST00000263274 RNF150Q9ULK6 438 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 PHOX2AO14813 284 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 GGNQ86UU5 652 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 NECAP1Q8NC96 275 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 DECR2Q9NUI1 292 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 MTCH1Q9NZJ7 389 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 OR14J1Q9UGF5 321 aa10.84□□□□□ -0.67
LIG1-201ENST00000263274 CEBPZOSA8MTT3 80 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 SYNGR4O95473 234 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 COX5BP10606 129 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 CA6P23280 308 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 TESK1Q15569 626 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 KCNE4Q8WWG9 221 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 HPSE2Q8WWQ2 592 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 ZNF665Q9H7R5 613 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 CACNG5Q9UF02 275 aa10.83□□□□□ -0.67
LIG1-201ENST00000263274 KIR2DS1A0A191URI9 304 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
LIG1-201ENST00000263274 CYTIPO60759 359 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 TRGC2P03986 189 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 FABP4P15090 132 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 KIR2DS4P43632 304 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 NKX6-1P78426 367 aaPredicted RBP10.83□□□□□ -0.68
LIG1-201ENST00000263274 KIR2DS1Q14954 304 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 LYPD6BQ8NI32 183 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 GNPNAT1Q96EK6 184 aaPredicted RBP10.83□□□□□ -0.68
LIG1-201ENST00000263274 TVP23CQ96ET8 276 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 ZPBPQ9BS86 351 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 GPR61Q9BZJ8 451 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 ARV1Q9H2C2 271 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 Q9N2K0 584 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 LYRM2Q9NU23 88 aaPredicted RBP10.83□□□□□ -0.68
LIG1-201ENST00000263274 TRAPPC2LQ9UL33 140 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 LOC102723996A0A087X1L8 192 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 ANKRD30BLA7E2S9 258 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 SOX15O60248 233 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 SCAF4O95104 1147 aaKnown RBP10.83□□□□□ -0.68
LIG1-201ENST00000263274 LRTM2Q8N967 370 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 DOK5Q9P104 306 aa10.83□□□□□ -0.68
LIG1-201ENST00000263274 A0A0G2JRQ6 117 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 PITX3O75364 302 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 PGLYRP1O75594 196 aaPredicted RBP10.82□□□□□ -0.68
LIG1-201ENST00000263274 CXCL1P09341 107 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 UCP3P55916 312 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 EIF3IQ13347 325 aaKnown RBP10.82□□□□□ -0.68
LIG1-201ENST00000263274 HERPUD1Q15011 391 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 GPR146Q96CH1 333 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 SCRT1Q9BWW7 348 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 MBP02144 154 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 SRP19P09132 144 aaKnown RBP10.82□□□□□ -0.68
LIG1-201ENST00000263274 MMP9P14780 707 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 PLA2G5P39877 138 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 B3GALT5-AS1P59052 145 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 OR8G1Q15617 311 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 ZNF787Q6DD87 383 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 SPSB3Q6PJ21 355 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.82□□□□□ -0.68
LIG1-201ENST00000263274 FAM185AQ8N0U4 392 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 Q8WTZ3 238 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 OR1A1Q9P1Q5 309 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 PPP1R2P9O14990 202 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 DEGS1O15121 323 aa10.82□□□□□ -0.68
LIG1-201ENST00000263274 LILRA1O75019 489 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms