RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TM2D1Q9BX74 207 aa23■■□□□ 1.27
SMARCD3-201ENST00000262188 UNC79Q9P2D8 2635 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 IGKV1D-17A0A075B6S4 117 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 RAB27BO00194 218 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 IFNA10P01566 189 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 PSG2P11465 335 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 RAB4AP20338 218 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 ATP5J2P56134 94 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 TMEM50BP56557 158 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 SMIM21Q3B7S5 101 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 NKAPLQ5M9Q1 402 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 DNLZQ5SXM8 178 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 OLFML2AQ68BL7 652 aa22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 DUX4L9Q6RFH8 374 aaPredicted RBP22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 URM1Q9BTM9 101 aaKnown RBP22.99■■□□□ 1.27
SMARCD3-201ENST00000262188 MEX3AA1L020 520 aaKnown RBP22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 NAP1L6A6NFF2 107 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 OR2AT4A6NND4 320 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 SNRPGP15A8MWD9 76 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 SIRPB1O00241 398 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 GYPAP02724 150 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 PLAC9Q5JTB6 97 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 RBMS3Q6XE24 437 aaKnown RBP22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 CD177Q8N6Q3 437 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 MGAT4CQ9UBM8 478 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 WIPI2Q9Y4P8 454 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 AMY2BP19961 511 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 BLVRBP30043 206 aaPredicted RBP22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 FAM89BQ8N5H3 189 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 CHST4Q8NCG5 386 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 RXFP4Q8TDU9 374 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 DYRK2Q92630 601 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 PHYHIPLQ96FC7 376 aa22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 S100A16Q96FQ6 103 aaKnown RBP22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 ZNF701Q9NV72 531 aaPredicted RBP22.98■■□□□ 1.27
SMARCD3-201ENST00000262188 PPIAL4EA0A075B759 164 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 OOEPA6NGQ2 149 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 PPIAL4DF5H284 164 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 PPIAL4FP0DN26 164 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 CPT2P23786 658 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 PTH2RP49190 550 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 HABP2Q14520 560 aaPredicted RBP22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 Q6P435 159 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 C6orf201Q7Z4U5 140 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 C1orf87Q8N0U7 546 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 ARHGAP5-AS1Q96IT6 56 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 ARL6Q9H0F7 186 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 C20orf85Q9H1P6 137 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 GPN1Q9HCN4 374 aaPredicted RBP22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 PPIAL4AQ9Y536 164 aa22.97■■□□□ 1.27
SMARCD3-201ENST00000262188 TRAV18A0A075B6X5 111 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 METTL21EPA6NDL7 271 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 PPIHO43447 177 aaKnown RBP22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 GSTZ1O43708 216 aaPredicted RBP22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 SIX6O95475 246 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 OR2H2O95918 312 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 HAND1O96004 215 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 ZNF44P15621 663 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 GNB3P16520 340 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 GABRA2P47869 451 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 OR10R2Q8NGX6 335 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 C2CD4CQ8TF44 421 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 RAB40AQ8WXH6 277 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 LURAP1Q96LR2 239 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 ANKRD17O75179 2603 aaKnown RBP22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 FOXI3A8MTJ6 420 aaPredicted RBP22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 IL5P05113 134 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 RPA2P15927 270 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 ZNF146Q15072 292 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 BPIFB2Q8N4F0 458 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 ZNF561Q8N587 486 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 NEU1Q99519 415 aa22.96■■□□□ 1.27
SMARCD3-201ENST00000262188 KNG1P01042 644 aa22.95■■□□□ 1.26
SMARCD3-201ENST00000262188 MUC1P15941 1255 aaPredicted RBP22.95■■□□□ 1.26
SMARCD3-201ENST00000262188 TMEM69Q5SWH9 247 aa22.95■■□□□ 1.26
SMARCD3-201ENST00000262188 TMEM88Q6PEY1 159 aa22.95■■□□□ 1.26
SMARCD3-201ENST00000262188 CCL13Q99616 98 aa22.95■■□□□ 1.26
SMARCD3-201ENST00000262188 TRAV24A0A0B4J272 114 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 CTDSPLO15194 276 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 PRDX2P32119 198 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 TEX36Q5VZQ5 186 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 LYPD2Q6UXB3 125 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 OR56B1Q8NGI3 324 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 CMTM3Q96MX0 182 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 CHST6Q9GZX3 395 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 RHOFQ9HBH0 211 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 GPR31O00270 319 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 DEGS1O15121 323 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 TAS2R20P59543 309 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 COL10A1Q03692 680 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 RNASE12Q5GAN4 147 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 STUMQ69YW2 141 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 FGFRL1Q8N441 504 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 C15orf54Q8N8G6 183 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 CHODLQ9H9P2 273 aa22.94■■□□□ 1.26
SMARCD3-201ENST00000262188 ITPR2Q14571 2701 aa22.93■■□□□ 1.26
SMARCD3-201ENST00000262188 MECP2P51608 486 aaKnown RBP22.93■■□□□ 1.26
SMARCD3-201ENST00000262188 CD81P60033 236 aa22.93■■□□□ 1.26
SMARCD3-201ENST00000262188 RAB2AP61019 212 aa22.93■■□□□ 1.26
SMARCD3-201ENST00000262188 MRPS11P82912 194 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms