RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ANXA10Q9UJ72 324 aa10.59□□□□□ -0.71
SPG11-201ENST00000261866 GUK1Q16774 197 aa10.59□□□□□ -0.71
SPG11-201ENST00000261866 GPX7Q96SL4 187 aaPredicted RBP10.59□□□□□ -0.71
SPG11-201ENST00000261866 CES1P1Q9UKY3 287 aa10.59□□□□□ -0.71
SPG11-201ENST00000261866 RRN3P1Q2M238 152 aa10.59□□□□□ -0.71
SPG11-201ENST00000261866 OR8I2Q8N0Y5 310 aa10.59□□□□□ -0.71
SPG11-201ENST00000261866 CFHR5Q9BXR6 569 aa10.59□□□□□ -0.71
SPG11-201ENST00000261866 TDRD15B5MCY1 1934 aaKnown RBP10.58□□□□□ -0.72
SPG11-201ENST00000261866 FCN1O00602 326 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 SPICQ8N5J4 248 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 RAXQ9Y2V3 346 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 HS3ST3B1Q9Y662 390 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 C1QAP02745 245 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 RNF165Q6ZSG1 346 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 ZDHHC22Q8N966 263 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 ARF6P62330 175 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 SLC25A53Q5H9E4 307 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 FAM78BQ5VT40 261 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 DEGS2Q6QHC5 323 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 OR2C3Q8N628 320 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 RNF122Q9H9V4 155 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 M0R3E3 92 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 CLEC18BQ6UXF7 455 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 ZNF714Q96N38 554 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 SH2D2AQ9NP31 389 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 FBXL17Q9UF56 701 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 SLC45A2Q9UMX9 530 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 OR51B2Q9Y5P1 312 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 MMP24Q9Y5R2 645 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 CELA3AP09093 270 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 SCGB1A1P11684 91 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 COX6A1P12074 109 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 RPL24P83731 157 aaKnown RBP10.58□□□□□ -0.72
SPG11-201ENST00000261866 RAB40CQ96S21 281 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 M0R2Z0 102 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 HLA-GP17693 338 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 LYZL2Q7Z4W2 148 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 MRPL24Q96A35 216 aaKnown RBP10.58□□□□□ -0.72
SPG11-201ENST00000261866 TMEM18Q96B42 140 aa10.58□□□□□ -0.72
SPG11-201ENST00000261866 HPXP02790 462 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 REG1AP05451 166 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 RPL29P47914 159 aaKnown RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 KCNMB1Q16558 191 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 PRNTQ86SH4 94 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 ZNF680Q8NEM1 530 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 PIMREGQ9BSJ6 248 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 SLIRPQ9GZT3 109 aaKnown RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPG11-201ENST00000261866 KRTCAP3Q53RY4 240 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 LSMEM1Q8N8F7 131 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 DDA1Q9BW61 102 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 NKX2-6A6NCS4 301 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 J3QT63 122 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 SSBP1Q04837 148 aaKnown RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 TIMP4Q99727 224 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 SNAI3Q3KNW1 292 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 TEX30Q5JUR7 227 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 DMKNQ6E0U4 476 aaPredicted RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 ZNF561Q8N587 486 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 BVESQ8NE79 360 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 ADIPOR1Q96A54 375 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 TPRP12270 2363 aaKnown RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 SYNGR1O43759 233 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 PGA3P0DJD8 388 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 HLA-DRB3P79483 266 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 IGSF11Q5DX21 431 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 STARD4Q96DR4 205 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 WFDC6Q9BQY6 131 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 CCL27Q9Y4X3 112 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 DICER1Q9UPY3 1922 aaKnown RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 PPYP01298 95 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 MRGPRGQ86SM5 289 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 SLC26A10Q8NG04 563 aa10.57□□□□□ -0.72
SPG11-201ENST00000261866 RGP1Q92546 391 aaPredicted RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 MARF1Q9Y4F3 1742 aaKnown RBP10.57□□□□□ -0.72
SPG11-201ENST00000261866 A0A1W2PP11 408 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 VDAC1P21796 283 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 C16orf82Q7Z2V1 217 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 ZNF519Q8TB69 540 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 REPIN1Q9BWE0 567 aaKnown RBP10.56□□□□□ -0.72
SPG11-201ENST00000261866 OR10D4PQ8NGN7 298 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 C1RLQ9NZP8 487 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 PIKFYVEQ9Y2I7 2098 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 MPC2O95563 127 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 LY6DQ14210 128 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 Q8WTZ3 238 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 LOXL4Q96JB6 756 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 C12orf57Q99622 126 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 IGHV3-23P01764 117 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 TMEM33P57088 247 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 C21orf62-AS1Q17RA5 79 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 RPEL1Q2QD12 228 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 SIGLEC12Q96PQ1 595 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 METTL1Q9UBP6 276 aaKnown RBP10.56□□□□□ -0.72
SPG11-201ENST00000261866 COL5A3P25940 1745 aaPredicted RBP10.56□□□□□ -0.72
SPG11-201ENST00000261866 SLC35B1P78383 322 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 AANATQ16613 207 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 MPV17LQ2QL34 196 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 C10orf113Q5VZT2 155 aa10.56□□□□□ -0.72
SPG11-201ENST00000261866 TRAV20A0A0B4J274 112 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms