RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HLA-DRB3P79483 266 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 BAK1Q16611 211 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 OR1L1Q8NH94 360 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 TRIM63Q969Q1 353 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 GAL3ST2Q9H3Q3 398 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 ZNF286AQ9HBT8 521 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 KCNIP1Q9NZI2 227 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 ONECUT1Q9UBC0 465 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 OPN4Q9UHM6 478 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 MGAT4AQ9UM21 535 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 INSIG2Q9Y5U4 225 aa12.99□□□□□ -0.33
CCDC90B-201ENST00000260054 C17orf98A8MV24 154 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 NPIPB11E5RHQ5 1161 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 FABP7O15540 132 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 HBZP02008 142 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 GSTT2P0CG29 244 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 GSTT2BP0CG30 244 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 NAT1P18440 290 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 RCVRNP35243 200 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 GDNFP39905 211 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 PPP5CP53041 499 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 HERPUD1Q15011 391 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 TRAT1Q6PIZ9 186 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 BTNL3Q6UXE8 466 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 SPNS3Q6ZMD2 512 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 LYSMD2Q8IV50 215 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 TMEM186Q96B77 213 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 KIRREL1Q96J84 757 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 DMRTB1Q96MA1 342 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 LINC00574Q9H8X3 128 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 HIF1ANQ9NWT6 349 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 ANXA10Q9UJ72 324 aa12.98□□□□□ -0.33
CCDC90B-201ENST00000260054 ABCA1O95477 2261 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 TRAV20A0A0B4J274 112 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 IGKV1-6A0A0C4DH72 117 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 A0A1W2PPH5 198 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 TGFAP01135 160 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 ZNF16P17020 682 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 KIR2DS4P43632 304 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 DVL1P1P54792 670 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 ACTBP60709 375 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 ACTG1P63261 375 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 KIR2DS1Q14954 304 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 PRAMEF5Q5TYX0 476 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 Q8N7P7 452 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 ACANP16112 2415 aa12.97□□□□□ -0.33
CCDC90B-201ENST00000260054 SPINT2O43291 252 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 HLA-DMAP28067 261 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 CD40LGP29965 261 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 DLX1P56177 255 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 LTC4SQ16873 150 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 IGSF11Q5DX21 431 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 DCAF12L2Q5VW00 463 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 CYB5R2Q6BCY4 276 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 FAM53AQ6NSI3 398 aaPredicted RBP12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 HEPN1Q6WQI6 88 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 GLCCI1Q86VQ1 547 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 KIR3DL3Q8N743 410 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 SIRPDQ9H106 197 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.33
CCDC90B-201ENST00000260054 M0R1W7 72 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 F2RL2O00254 374 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 IL7P13232 177 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 SSBP1Q04837 148 aaKnown RBP12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 PAX8Q06710 450 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 KRTAP1-1Q07627 177 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 UTF1Q5T230 341 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 ZNF782Q6ZMW2 699 aaPredicted RBP12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 OR4A4PQ8NGN8 299 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 IL1F10Q8WWZ1 152 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 GALMQ96C23 342 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 CABLES2Q9BTV7 478 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 IDI2-AS1Q9NZ38 188 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 KPTNQ9Y664 436 aa12.96□□□□□ -0.34
CCDC90B-201ENST00000260054 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 RBP4P02753 201 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 IGHV1-8P0DP01 117 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 MMP9P14780 707 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 FPR2P25090 351 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 LOXL3P58215 753 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 PRB3Q04118 309 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 OR5AP2Q8NGF4 316 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 OR52L2PQ8NGH6 319 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 C18orf12Q96KH6 178 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 CCDC32Q9BV29 185 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 SIRT7Q9NRC8 400 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 OR1A1Q9P1Q5 309 aa12.95□□□□□ -0.34
CCDC90B-201ENST00000260054 ANKRD20A5PA0PJZ0 165 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 ZNF736B4DX44 427 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 SDCBPO00560 298 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 BET1O15155 118 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 PMP2P02689 132 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 CD3DP04234 171 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 HRH1P35367 487 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 RFX2P48378 723 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 ARPC4P59998 168 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 HTD2P86397 168 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 GNMTQ14749 295 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms